Hydractinia symbiolongicarpus: 130612573
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Entry
130612573 CDS
T09218
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130612573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsy04131
]
130612573
04121 Ubiquitin system [BR:
hsy04121
]
130612573
Membrane trafficking [BR:
hsy04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
130612573
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130612573
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_C
DSE1_N
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
F-box-like
HHH_3
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
PAC11
Beta-prop_ACSF4
Beta-prop_DCAF4
Beta-prop_EIPR1
CFAP251_N
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_SPT8
F-box
TRM82_WD
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_LRRK2
Beta-prop_NWD2_C
HHH
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
Beta-prop_RIG_1st
PQQ_2
Beta-prop_WDR11_2nd
PsbU
DUF655
HHH_5
HHH_6
Motif
Other DBs
NCBI-GeneID:
130612573
NCBI-ProteinID:
XP_057289887
LinkDB
All DBs
Position
10:complement(11599914..11605847)
Genome browser
AA seq
630 aa
AA seq
DB search
MDRPVIDFNTISIQELEQLPGIGKAKAAIIVEHRKLYSKYNSINDLIAVEGITKTLITKL
QDEYTIEFGNNENADPVRRKSVYLKRQFRRSTSQTCSCSDDESPTPEKKLKNSDIVSPCS
SIGSSISHVLPSCASPGYAVRKRLHSEASSPPARLQPWLDQFQDWGREERLIALNDLIGL
CDMSVVRHMMAKIEPHFQRDFISLLPKELALYVLSFLEPKDLCFAAKTCRYWRILAEDNL
LWKEKCDEYDMFCSISDSLKNLNSTSTKKNKEIPYKQSFLYCHKLEMNWRCQPLRSAKYL
KGHDDHVVTCLQFDGVKIVSASDDNTLKVWSAVTGNLIRTLVGHTGGVWSSQLMDNIVVS
GSTDRTLRVWNADSGECIHVLQGHTSTVRCLAMHGNSVVSGSRDGTLRVWDVIEGKCLHV
LIGHAAAVRCVQFDGKHVVSGAYDYLVKVWDVESETCLHTLSGHSNRVYSLQFDGKYIVS
GSLDTSIRVWDAKNGQLLHTLLGHQSLTSGMVLKNNYLVSGNADSTVKIWNIVTGKCLHT
LSGPNKHQSAVTSLQFNSKFVVTSSDDGSVKLWDMKTGEFIRDLVELDSGGSGGVVWRVK
CNERKLVCAVGSRNGTEETKLLVLDFDVYK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggacagacctgtaatagattttaatacaataagcatacaagaacttgaacaactgcca
ggaattggaaaagcaaaagcagctatcatcgtagagcaccgcaaactttattcgaaatat
aactctattaatgacctcatagccgtggaaggaatcacgaaaactctgataacaaaatta
caagatgaatatactatcgaatttggcaataatgaaaatgcagatcctgttcgtcgcaaa
agcgtttatttaaaaaggcaatttagaaggagtacatcacaaacatgttcgtgttcagat
gacgaatctcccacaccggagaaaaagctaaaaaactctgatattgtatcgccctgtagc
agtataggaagttcaatttctcatgtcttaccttcatgtgccagtcctgggtacgctgta
cgcaagagacttcattctgaagcttcaagcccgccagctcgcttgcagccatggcttgat
cagtttcaggattggggtcgtgaagaaagacttattgctttaaatgatcttataggtctg
tgtgacatgtctgtagtaaggcatatgatggcaaaaattgagccacactttcaaagggac
tttatatctttgttgcctaaagaattagctttgtatgtcctgtcatttttggagcccaag
gatttgtgtttcgctgctaagacatgtcgctactggagaatattagctgaagataatttg
ttgtggaaggaaaaatgtgatgaatatgacatgttttgttcaatcagtgacagtctaaaa
aatttaaattcaacttctaccaaaaaaaacaaagaaataccttacaagcagtcatttctt
tactgtcacaagctagaaatgaactggcgttgtcagccattaaggtcggcaaaatactta
aagggacatgatgaccacgttgtgacatgcctgcagtttgacggtgtcaaaattgttagt
gcttctgatgacaatacgcttaaagtttggtcagctgtgactggaaatcttattagaaca
ctggttggccacacaggtggtgtttggtcttctcaactgatggacaacatagttgttagc
ggttccactgacagaactctgcgtgtttggaatgcagattctggcgagtgtatacatgta
ttacaaggccacacttccactgttcgttgtttggcaatgcatggaaactctgttgttagt
ggttcaagagatggaacactccgtgtgtgggacgttatagaaggcaaatgtttgcatgtg
ttaattggtcatgctgcagctgtcagatgtgttcagtttgatggaaagcatgtagtcagc
ggtgcatatgactatttggtaaaagtatgggatgtagaatctgagacatgtcttcataca
ttatctggacattctaatcgagtttattcattacagtttgatgggaaatacattgtatca
ggctcattggacacatcaattcgtgtatgggatgcaaaaaatggtcaattgctacacact
ttacttggtcatcagtcattgacaagtggaatggttttaaaaaataactatttagtctca
ggaaatgctgactcgacagtgaaaatttggaacatagttacagggaaatgtttgcatacc
ctgtcaggacctaacaaacaccaaagtgctgtcacttccttgcaatttaactctaaattt
gttgtgactagttcggatgatggctctgtgaaactgtgggatatgaaaactggtgaattc
attagggatttagtagaattagacagcggtggtagcggaggtgttgtgtggagggtgaaa
tgtaatgagagaaaacttgtctgtgccgttggaagtaggaatgggactgaagaaacaaaa
ctacttgtgttagattttgatgtttataaataa
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