Hydractinia symbiolongicarpus: 130622496
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Entry
130622496 CDS
T09218
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A/B-like
KO
K13158
heterogeneous nuclear ribonucleoprotein A2/B1
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130622496
03041 Spliceosome [BR:
hsy03041
]
130622496
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsy04147
]
130622496
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
130622496
Spliceosome [BR:
hsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
130622496
Exosome [BR:
hsy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130622496
Exosomal proteins of colorectal cancer cells
130622496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
RRM_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
130622496
NCBI-ProteinID:
XP_057293936
LinkDB
All DBs
Position
12:13124976..13131980
Genome browser
AA seq
394 aa
AA seq
DB search
MSFTSMESEEQERKLFVGGLNKSLSDEEGLRNFFTQYGSIIDCTIMRDGDKQSRGFGFVL
FEHATSVDDIIALKKEGKNFTLDDHHIEVKRALPKVPGGNAGSSRTGGLYRKIFVGGLPS
TITDEDLRTYFERFGRVNEVELLRDRESNRLRGFAFVTFDDEDSADKCIQRRTHEICKKI
CEVKRAQTRSTLTKYEHDDGGRQRDNYHNSNYHHRDGGDRHGAHQASPSGGSLGMAEVNQ
LIQQAFVMGQQSVLQPSAMQPPTAASLLALTGSSGASFAAPPVNNALLQALISQQHAANQ
PPPAPIAPPQAAPANTGAINQLAQLLQGKIDPNALTALLKHEPDMRSGPKPANSGSYSTT
YPPTSAYDLYYGQQNSSNYGSSKDESDSKRYRPY
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcacatccatggaatcagaagaacaagaaagaaaattatttgttggtggctta
aataagagcctaagtgacgaagaaggtttaagaaatttttttacgcaatatggaagtatt
attgattgcacaattatgagagatggagataaacagtctcgtggatttggctttgtttta
ttcgaacatgccacttcggtagatgacataatagcgttgaagaaagaaggtaagaatttt
acattggatgatcatcacattgaagttaaacgagcattgccaaaggtacccggtggtaat
gcaggctcatcaagaaccggaggcctttacagaaaaatctttgttggtggtttacccagc
accataacggatgaagatttacgtacatattttgaacgatttggtcgtgttaatgaagtt
gaattacttagagaccgtgaatctaacagactccgtggttttgcttttgttacatttgat
gacgaagattctgctgacaaatgcattcagagacggactcatgagatttgcaaaaaaata
tgtgaggttaaaagagctcaaactagatcaacccttacaaagtatgagcatgatgatggt
ggaagacagagggataattaccataacagtaattaccaccatagagatggtggggataga
cacggtgctcaccaagcatcaccatctgggggaagtcttggtatggctgaagttaaccag
ttaatacaacaagcttttgtgatgggtcagcaaagtgtattacaaccatcagctatgcaa
cctccaactgcagcctcattgcttgcactgacaggatcatcaggtgcatcatttgcagca
ccaccagttaacaatgctcttcttcaagctttgattagtcaacaacatgcagctaatcaa
ccacctcctgctcctattgccccgccacaagcagcaccagctaatactggagcaattaat
cagcttgcacaacttcttcagggaaaaatagatcctaatgcattgactgctttattgaaa
catgagccagacatgcgttcagggccaaaaccagcgaacagtggtagttattctacaacc
tacccgcctacatcagcttatgacctttattatggccagcaaaattcgtcaaattatggt
tcttccaaagatgaatcagattctaagaggtacaggccatattaa
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