Hydractinia symbiolongicarpus: 130622952
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Entry
130622952 CDS
T09218
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130622952
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Motif
Pfam:
TRAF-mep_MATH
MATH_2
HAP1_N
SMCR8_C
Vps52_CC
Sec3_CC
CLZ
Baculo_PEP_C
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
130622952
NCBI-ProteinID:
XP_057294393
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Position
13:20583289..20607437
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AA seq
498 aa
AA seq
DB search
MEVAITEIFFLNGFIILLRSVVYIFKYRNRCMTVILNFCFDHSKLFFLQNTQKETIILMD
SCDDQKRSGYEVNLIDDLPQRLKCPLCKNLIRKPIQTQRGELACQFCYDVNKRDNICPID
HEPITDNTVHRDRFQEQIIMKMNCYCINRERGCEWQGIVAEAEDHHSLCPYKPSNCCFCQ
LEIKEKSTDEHLTQCPTLIEVFKDGACFFHSIGCPFRPSCIEKLARHLQRDAYQHTYLQQ
VKLTQYKTESENQQMEYKQIANNTKEMEKSFKRQIENLTSQLTSIQTQMVRMQQNLRESV
TTISNIENKRPINGEHKQQDMLKTFQDSIGDVSEKMSTIDLKQQLLENTTYDGRILWKID
QFEHRMQQAITGKVTALHSAPCFTKRYEYKFCGRLYLNGDGIGKCSHLSLFLVVMKSEYD
NLLDWPFNKHVMFRLINQQNYEKSIQESFLPDSNSSSFQKPVREMNVAAGCPLFITKEKL
YDEGFVKDNCIFIEISAK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggctattactgaaatcttttttttaaatggatttataatacttctgcgatct
gttgtttatatttttaaatacaggaatagatgtatgactgttattctcaacttttgtttt
gaccactcaaaactcttttttttgcagaatacacagaaagaaactattattttgatggat
tcatgtgatgatcaaaaaaggagtgggtacgaagttaatttaatcgatgatttaccacaa
agattaaaatgtccactttgcaagaatctgataagaaaacccattcaaacacaaagagga
gaattggcatgtcaattttgttatgacgtcaacaaaagagacaacatatgtccaattgat
cacgaaccaatcacagacaacaccgtgcaccgtgatcgatttcaagaacagattatcatg
aaaatgaattgttattgcattaacagagaaagaggatgtgaatggcaaggtattgttgct
gaagcggaggatcatcattcgctttgtccctacaaaccttcaaattgttgtttctgtcaa
ctggagataaaagaaaagtccacagatgaacatctcacacagtgtccaacattaattgaa
gtgttcaaagacggagcgtgtttttttcacagcataggatgtccttttcggccttcgtgt
atcgaaaaacttgcgagacacttacaacgtgacgcgtatcaacatacctacttgcagcaa
gtcaaactaactcaatataaaactgaatcagaaaatcaacaaatggaatacaaacagatt
gcaaataataccaaagagatggaaaaaagcttcaaacgtcaaattgaaaatttaacatct
caacttacttccattcagacgcaaatggttaggatgcaacaaaatcttagagagtctgta
actacaatatcaaatattgaaaacaaacgaccaattaatggcgagcacaaacagcaggat
atgttaaagacatttcaagattcaattggagatgtaagtgagaagatgtcaacaattgat
ttgaaacaacaattacttgagaacacgacttatgatggccgaattttgtggaagattgat
caatttgaacacaggatgcaacaagccattacagggaaggttaccgcactacatagcgcg
ccgtgttttacaaaaagatatgaatataaattttgcggtcgcttgtatcttaatggtgac
ggaattggaaagtgttcgcatctatccctgttcttagtagtaatgaaatcagagtatgat
aatttactggattggccatttaacaagcatgttatgtttcgcctaatcaatcaacagaat
tatgagaaaagcattcaagaaagttttcttcctgacagtaactcttctagttttcaaaaa
ccagtcagagaaatgaatgttgcggctgggtgtccattatttatcacaaaagagaagttg
tatgatgaaggatttgtgaaagataattgcatttttatcgaaatatctgccaaatga
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