Hydractinia symbiolongicarpus: 130624947
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Entry
130624947 CDS
T09218
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsy04040
]
130624947
Ion channels [BR:
hsy04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130624947
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
130624947
NCBI-ProteinID:
XP_057295992
LinkDB
All DBs
Position
14:complement(16163222..16194501)
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AA seq
1808 aa
AA seq
DB search
MEENNTPANGSIDPFSYNQIQRLNNTTSGGVPGATVTAKKKATANVGHNLRPKRALCCLT
VSNPLRRACIAIVEWKPFDFFILANIFATCAVLAATEPLPNGDTSITNERMEKAEYFFIV
VFTIEAMLKIIAYGFAFHPGAYLRNAWNILDFSIVIIGFLTLIFEKYIELDVKALRAFRV
LRPLRVVSGVPSLQIVLTSILKALIPLFYIALLVVFVIIIYAIIGVELFMGKLHFTCYNK
TSKSIIYEEPHPCSTSDKFGFQCPPGTSCENVWKGPNFGITSFDNMGLAGLTVFTCVTLE
GWTDVMYFVEDAMGNYWIWIYFVTLIIWGSFFVLNLVLGVLSGEFAKEKARQTKSGKFQK
VREKHLVDEAVKGYLDWIQQAEDIDNPDEDSGDRDFDLANGKRSSKRLSEFHGGINITPK
LQDALGQASKSDKIKKRFFKFHHRLRRICRKVVKSQTFYWAVIIAVFLNSLVLAVEHYNQ
PKYITLFLHRANYFFLGLFTFEMLLKVYCLGFHGYWLSLFNRFDCLVVISSLLEVAITVP
TGLTPIGISVLRCIRLLRIFKVTRYWESLSNLVESLVNSIKSIASLLLLLSLFILIFALL
GMQIFGGRFNFEDITMPRSNFNSFWRSLVTVFQILTGEDWNAVMYYGIKSWGGVGKPECV
VAIIYFISLVVIGNYILLNVFLAIAVDNLADAENLTKIDKEEKKRKKQEKKMKILRKRAQ
NASPQQLSIDSENPSVIGPAANLCIPLPMQNSTDTERASEAVSISLTSSMDRQATVTSED
EHSNLDNTKMRPLRLSEINLLKDIPDPMPEARSLFLFKSGNMFRIFCYKLCTHPYFVNSI
LVLICCSSVLLSAEDPLNKDQIRNQVLDYFDYIFTAIFTVEILIKLVAYGAFLHKGSFCR
GFFNVLDLLIVSVSLVAIILRNSKEISVVRILRVIRVLRPLRAINRAKGLKHVVQCVFVA
IRSIGNIMLVTVLFQFLFAVIGIQLFKGTFSYCTDKTALTEADCKGTFIEHNNGPMTKDL
LDGVVTEREWKSHKFNFDNVFQAMMTLFVVMTFEGWPGILENAIDSTKVDQGPIEDNRPW
VAVYFVIYIIIIAFFMVNIFVGFVIVTFQSEGEEEYKDCELDKNQRKCIEYVLRVRPICR
FKPEQQTQFHIWRVVTSRMFEYMIFAFIVANTVVLGAQYFEAPARYETVLDGFNIGFTMV
FLLECILKLLAFKPRNYFRDPWNIFDFIIVLGSIADIIIGEVYKDNTIKFNFFRLFRALR
LVKLLSKGAGIRTLLWTFMKSFQALPYVGLLILLLFFIYAVIGMQVFGGIKTDDDSAINR
YNNFQTFPAAALVLFRSSTGENWQQIMNSCLDKPTTLCEMDPTQTCGNDFAYVYFITFNM
ICSFLIINLFVAVIMDNFDYLTRDWSILGPHHLEEYVRTWSEYDSEATGRMKHVDIVSML
KRIEPPLGFGKCCPHREACKRLVSMNMMMNNDGTVDFHATLFALVRTSLNIKKPDVKSNT
AKENGELRSIIKHIWPGTSEKLLDKVVPRPDCEEGITVGKFYATFLIQEYFRRFKKKRQD
ERRKKNADATVSLKAGLRTIQDVGPEIQRRLSGEIDEGPEDELKHDKDPKRRSFIDSIAS
SVRRSMTFGEADKKRNAFGKKANAMEQPLLEVSSFGSDELKRHSYHASSSCEKSSIEDSS
VDVESNDKLSISQRIQRLSPIQFGRKKRPASSNFEPEVKVQHGRSSGTKTIPDIIVRRPT
LSEQPRGLLELQNRGSLVESCPDRKEETNKGSKYRRPSLKLLPQASAIEHSDTEDLSVVG
EDDIVGDE
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaacaatactccagcaaatggatctatagatccatttagttataatcaaatt
cagcggttgaataatactacgagtggcggcgtccctggcgctacagtgactgcaaaaaag
aaagcaactgcaaatgttgggcataacctccgaccaaaaagggcactatgttgtttgact
gttagcaatcccttaaggcgagcatgcattgctatagttgaatggaaaccatttgatttc
ttcatattggcaaatatatttgcaacatgtgcggttcttgctgccacagaaccactacca
aatggggacacatcaattacaaacgaaagaatggagaaagccgagtatttttttattgta
gtttttactattgaagcaatgctgaagataattgcttatggttttgcattccatccgggt
gcttatcttcgaaacgcatggaatattttagatttttcaatagttattataggatttctt
actttaattttcgaaaaatatatagaattagacgtcaaagcattgcgagcttttcgcgta
ctaagaccactacgtgtagtttctggtgtaccaagtttacagattgttttaacgtcaatc
ttgaaagcactgataccgttgttctacattgccctattagttgtttttgtaattataata
tacgccattattggtgtggaactttttatgggcaaacttcacttcacttgctacaataaa
acatcaaagagtataatatacgaggaaccacatccttgcagtacaagcgataagtttggt
ttccaatgtccaccgggcaccagttgcgagaacgtttggaaaggaccaaattttgggata
actagtttcgacaacatgggattggctggattgacggtatttacgtgtgtgacgctagaa
ggctggacagatgtcatgtactttgttgaagatgcaatgggaaattactggatatggata
tactttgtcacactcattatatggggttcattcttcgtgttgaaccttgttcttggtgtc
ctgagtggtgaatttgcgaaagagaaagcacgccaaacgaaatctgggaaatttcagaaa
gtgagagaaaaacatcttgttgatgaagctgtaaagggatatttagattggattcaacaa
gcagaggacatagataaccctgatgaagacagtggagatcgagatttcgacttagcaaat
gggaaaaggtcgtcgaaacggcttagcgagtttcatggtgggattaatataactcccaag
ttgcaagatgcactgggacaagcaagcaaatcagataaaatcaaaaaacgttttttcaag
tttcatcatcgtttgcggaggatatgtcggaaagttgtcaaatcacaaactttttactgg
gctgttatcattgccgtctttctaaattcgctggttcttgctgttgagcactacaaccaa
ccaaaatacatcactttgtttttacatcgcgcaaattatttctttttgggtttatttact
tttgaaatgcttctcaaagtctactgccttggttttcatggatattggctttcattgttc
aacagatttgactgtctggttgtcattagtagtttacttgaggtggccatcacagtacca
acaggtttaacgccaatcggtatcagcgtgctacgatgtattcgattacttcgtatattc
aaagtaaccagatattgggagtcactgagcaacttggtggagtcacttgtcaacagtatc
aaatctatagccagtttgctgctgttactttccttgttcatactcatctttgcattactt
ggaatgcaaatctttggaggacgatttaattttgaagacattacaatgcctagaagcaac
ttcaactcgttctggcgatctcttgttaccgtatttcagattctaactggtgaagactgg
aatgcagttatgtattatggaattaaatcttggggaggtgttggaaaaccagaatgtgta
gttgccattatatactttatcagtttagttgtaattggaaattacattttgttgaatgtt
tttttggctattgctgtcgataatctagcagatgcagaaaatctaaccaaaatagataaa
gaagaaaagaaaagaaaaaagcaggagaagaagatgaaaatattacgaaaacgtgcgcaa
aatgcatcaccacagcagcttagtatcgattcagagaatccatcagtgatcggccctgca
gcaaatttgtgtatccctttgccaatgcaaaactctacagatactgaacgagcaagtgag
gcagtatcaatctcgcttacttcaagcatggaccgtcaagcaacagttacttcagaagat
gaacacagcaatttggacaacaccaaaatgagaccacttagattgtcagaaatcaactta
ctaaaagatattcctgatcctatgcctgaagcgagatcactgtttctatttaagtctgga
aacatgtttcgtatcttttgttacaagttatgcactcatccatattttgtaaattccata
ctggtgttgatttgctgcagtagtgtacttctttcagcagaagatcctctcaataaagat
caaatcagaaatcaagtgttagattattttgactacatatttacagccatattcacagtt
gaaattctgatcaagcttgtggcatatggtgctttcttgcataaaggaagtttctgtcgc
ggtttcttcaacgttcttgatttgctgattgtgtcagtatcacttgttgccattatactc
agaaactctaaagaaatatcagtggttcgaattctacgtgttatccgtgtgttgcgtcca
cttcgagctattaatagggcaaaaggcctgaagcacgttgtacaatgtgtgttcgtggca
ataagaagtattggtaacataatgctggttacagttctgtttcagtttttatttgctgtc
attggtattcaactttttaagggtacattttcatactgcactgataaaacagctctaact
gaagccgattgcaaaggaactttcattgaacacaataatggaccaatgactaaagacctt
ctagacggcgtggtgacggagcgtgagtggaagtcacataagttcaattttgacaacgtg
tttcaagctatgatgacactctttgttgtgatgacgtttgaaggatggccaggaatttta
gaaaatgcaatcgactctacgaaagtggaccagggaccaattgaagataaccgaccctgg
gttgcggtttattttgttatatacatcatcatcatcgctttctttatggtgaatattttt
gtcggtttcgttattgtcacgtttcaaagtgagggcgaagaagagtacaaggattgtgaa
ctggataaaaatcagagaaagtgtattgaatatgtcttgcgtgtacgcccgatatgccga
ttcaaaccggaacaacaaacccagttccatatttggagagtagtgacgtcacggatgttt
gagtacatgatcttcgctttcatcgtagctaacactgtagtactcggagctcagtatttc
gaagcaccagctagatacgagacagttttggatgggtttaatattggttttacaatggtt
ttcttactggagtgtatcctaaagcttctcgcattcaaaccaagaaattatttcagagat
ccgtggaatatctttgattttattattgttcttggtagcattgctgatattattattggt
gaagtttacaaagacaacacaatcaagtttaatttcttccgcctgtttcgtgcacttcgt
ctggtgaaattactaagcaaaggtgctggtattcgaacattattatggacctttatgaaa
tcttttcaggcgcttccatacgttggccttcttatattactcttattcttcatctacgca
gtcattggaatgcaggtttttgggggaattaaaactgatgatgactcagcaattaatcgt
tataataattttcaaacttttccagctgcagcgttggtgttgtttcggtcgtcaacgggt
gagaattggcagcagattatgaattcgtgtctagataagcctaccacgctgtgtgaaatg
gatcccacgcaaacatgcggcaatgattttgcttatgtgtattttatcaccttcaacatg
atctgttcttttttgattattaacttgtttgtggctgtcatcatggataactttgattat
cttacacgtgattggtcaattcttggtccacatcatttggaggagtatgtaaggacgtgg
tcagaatacgactcggaagcaactggtcgcatgaaacatgtggacatagtgagcatgtta
aaacgaatcgagcctccgctgggttttggtaaatgctgtcctcatagagaggcttgcaag
cgtctcgtcagtatgaacatgatgatgaacaacgatggtacagtcgacttccatgctact
ttgttcgcactcgttcgaacatcactaaatattaaaaaacctgacgtgaaatccaataca
gccaaggagaatggagagctacgaagtataatcaaacatatttggcctggaacgagtgag
aaattgctagacaaagtagttcccaggcctgattgtgaggaaggcattacagtggggaaa
ttctacgccacgtttttaattcaagaatattttcgacgctttaagaagaaacgacaagat
gaaagacgcaagaagaatgctgacgccacagtttcgcttaaggccggcctaagaacgatc
caggatgttggtcctgaaattcaacgacggctgtcaggtgaaattgatgagggtccagag
gacgagttaaaacatgataaagatccgaaacgtcgtagcttcattgacagcattgcaagc
tctgtacgccgctcgatgacgtttggagaggctgataaaaaacggaatgcgtttgggaag
aaggcaaacgcaatggagcagcctttactcgaggtctcgtcatttggtagtgacgaattg
aaaagacattcctaccatgcgtcgagttcctgcgaaaaatcatccattgaggattcatcg
gttgatgtggagtccaacgacaagttaagcataagtcaacgtattcaacgactatcacca
atacagttcggaagaaaaaaacgaccggcatcgtcaaatttcgaaccagaagtaaaagta
cagcacggtcgatctagcgggacaaaaacaataccggatataatcgttcgtagaccgacg
ctttctgaacagcctagaggcttgcttgaacttcaaaatagaggcagtctagttgaaagt
tgtcctgacaggaaggaagaaactaacaaaggaagtaagtaccgcagaccgagtttaaaa
ctcttaccacaagcaagcgccattgaacattctgatactgaagatttgtctgttgtggga
gaagacgacatagtcggcgacgaatag
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