Hydractinia symbiolongicarpus: 130625347
Help
Entry
130625347 CDS
T09218
Name
(RefSeq) intraflagellar transport protein 122 homolog
KO
K19656
intraflagellar transport protein 122
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsy03037
]
130625347
Cilium and associated proteins [BR:
hsy03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
130625347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Zn_ribbon_IFT122
WD40_Prp19
Zn_ribbon_IFT122_C
ANAPC4_WD40
TPR_GEMI5
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_RIG_2nd
TPR_IF140-IFT172
B-prop_COPA_B_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
TPR_7
TPR_IFT80_172
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WD40_like
WDR90_beta-prop_4th
Beta-prop_SPT8
E_motif
TPR_2
Motif
Other DBs
NCBI-GeneID:
130625347
NCBI-ProteinID:
XP_057296410
LinkDB
All DBs
Position
14:complement(17947344..17966858)
Genome browser
AA seq
1194 aa
AA seq
DB search
MRAIPTWVDKVHDKDQAPVCIYDIAFNPDGSQLIAASGNKVLVYDTADGSLVRALKGHKE
TVYCVAYAKNGKRFASGGADKCVIIWTNKLEGILKYTHNNAIQCIQYNPVNHQLASCTSD
DFGLWSSEQKSVSKHKLSSRALCCCWTNDGQYLALGLFNGIISIRNKSGEEKVKIERSGG
SPVWTMSWNPSVDETTDILAVGDWGQRLSFYQLSGKQIGKDRHLGFDPCSLSYFPKGEFL
VIGGSDKKCYLYTKEGVRLAVIGELQSWVWTCKARPEGNYVVCGSDDGTIAFYQLIFSTV
HGLYKDRYAYRDNMTDVIIQHLITEQKVRIKCRELVKRIAIYKHRLAVQMPERIVIYEIY
SNDAADMTYKIRERINKKVDCNLLVVTGNNLILCQEKRLQCLAFDGTKEREWQMESLIRY
IKVIGGPLGREGLLVGLKNGQILKIFVDNQFPILLLKQQTSVRCLDMSCSRKKLAVVDEN
NTVLVYSLETKELLFQEPNGNSVAWNTHNDDMLCFSGGGMLNIKAGSFPVHQQKVPGFVV
GFCGSRIFCLHVYNMSSVEVPQSTPMYQYLEKKMFRDAYRIACLGVTDGDWRALAMAALE
GSEYQIAKLAFVRVRDLKFLELIHSIEERRKRGGISNHVFLADIYAYQGRFHEAAKLYKS
TGNEEKALEMFTDLRMFEYAKEFLGSSDQRNVKKLIKKQAEWCKTTNDPRAAADMFIAAG
EFLKAVEILGENGWSEKLVELGRNLNKADKEPLTRCAQYLQQLRQFNYAGEMYLKLGDTK
QLVKLYVESLQWDEAFLLAEKHPELKDEVYVPYANWLAENDRFDEAQAAFHNAGRRTDAV
KVLEQLTLNAVVENRFNDAGYYFWRLSMQCLDIAGQKQSGELKDLEDNILEKFYEFQRKA
SIYYVYHTIQRFMEEPFTSQMPEPLFNMGRFLLHSLIKEVPHGVSRVHALFAVAKQGKSL
GAYKLARYAFDKLQTLRIPDRYQELIDLGSITIRSKPFQDSQDLLHMCYRCSTTNPLLNN
KGNQCINCSQPFIHSFIGFETLPLVEFVVDDDISDEEAMKLINMDTLVDASPDRWQDNTA
QQGNSQSLRMDGADSGMDEDDDPFATKLMSFEQGGGEYTPLVIGRPTLRKIPRTSVFVKK
WPSPLRYQFFRNILDDISITMCQSCFNLFHSEDFELLVLQQGYCPFCRAKQDFI
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgagagctataccaacgtgggttgataaagttcatgacaaagatcaagctcctgtctgt
atttatgacattgcctttaatcctgatggttcacaattgatagccgcatctggaaataaa
gttctggtgtatgacacagctgatggctcacttgttcgagctttaaaaggtcacaaggaa
actgtttattgtgtggcatatgcgaaaaatggcaaaagatttgcttccggtggagctgat
aaatgtgttatcatttggacaaataagttggagggcattttaaaatacacgcataacaat
gctatacaatgtattcaatacaatccagtaaaccatcaactcgccagttgtacttcagat
gactttggtttatggtccagtgagcagaagtcagtttccaaacataaactttcatcaaga
gctctttgttgttgctggacgaatgatggacagtatttagctcttggtttgtttaatggt
attattagcattagaaacaagtctggggaagaaaaagttaaaatagaacggtctggaggt
tcacctgtatggacgatgtcctggaatccgtctgtagatgaaacaacagacatccttgca
gttggtgactggggtcaacgtctgtctttttatcagttaagtggaaagcaaattggtaaa
gacagacatttgggctttgatccatgcagtttaagttatttccccaaaggagaatttttg
gtgattggaggatctgacaaaaagtgctatttgtacaccaaggaaggtgttcgacttgct
gttattggtgaacttcaaagttgggtgtggacgtgtaaagcacgacctgaaggaaactat
gtagtttgtggcagtgatgatggaacaattgcattttaccagcttatttttagcactgta
catggtttatacaaagacaggtatgcctatcgtgataatatgactgatgtgattatacag
catttgatcactgaacaaaaagttcgtataaaatgcagagagctggtcaaaagaattgca
atatataagcataggcttgcggttcaaatgccagaacgtattgtgatttacgaaatctat
tctaacgatgcagctgatatgacatataaaatcagagagagaattaacaagaaagtggat
tgtaatttattggttgttactggaaataacttgatcttgtgtcaggagaaacgtttacag
tgtttagcatttgacggaactaaagaacgggaatggcagatggaatctttgatcagatac
ataaaagtaataggaggcccacttggtagagaaggactcttggtgggactaaagaatggt
cagattctgaaaatctttgttgacaatcaatttccaatacttttattgaaacaacaaacc
agtgtgagatgtttggacatgtcctgcagtcgcaaaaaattggcagttgttgacgaaaat
aacactgttcttgtatatagtctggaaactaaagagttactatttcaggagcctaatggg
aacagcgttgcttggaatacacacaatgatgacatgttatgtttttctggtggtggcatg
ttaaatataaaggctggcagcttcccagtgcaccaacagaaagttcctggatttgttgtt
ggattttgtggctcccgtattttttgtcttcatgtctacaacatgtcctctgttgaagtt
ccacagtccactccaatgtatcaatatttggaaaagaaaatgttcagagatgcttacagg
attgcatgtcttggtgttactgatggtgactggcgtgcattagcaatggctgctcttgag
ggttcagaataccaaattgcaaaacttgcgtttgttcgagttcgagatctgaagtttttg
gaactcattcacagtatcgaggagagacgaaaacgtggtggaatcagtaatcatgtcttt
ttagctgacatatatgcatatcagggtcgttttcatgaagcagctaagttgtacaaaagt
actggtaacgaggaaaaggccttggagatgtttacagatttaagaatgtttgaatacgcc
aaagaatttcttggtagtagtgatcagcgcaatgtgaaaaagctgatcaaaaaacaagcg
gaatggtgcaaaacaacaaacgatcctagagctgcagctgatatgtttatagcagctggc
gagtttttaaaagctgttgaaattcttggagagaatggttggagcgaaaaattggttgaa
ttgggacgtaacctaaacaaagctgataaagaaccattaacaagatgtgcgcagtacctg
caacaacttcgtcagtttaattatgctggtgaaatgtatttaaaacttggagatacgaag
cagttggtcaagttgtatgttgaatcattacaatgggatgaagctttccttttggctgag
aaacatccagaattaaaggatgaagtttatgtaccgtatgcaaattggttggctgaaaat
gatcgttttgatgaagctcaagcagcattccacaacgctggacgcagaactgatgccgta
aaagtgttggaacaactcacattaaatgctgtcgtagaaaacagattcaacgatgcaggg
tattatttttggcgactttccatgcaatgtcttgatatcgctggtcaaaaacaatcaggt
gaactgaaagatttagaggataatattctagaaaaattttatgaatttcaaaggaaagct
agtatttattacgtgtatcacactatccaacgttttatggaagaaccatttacatctcaa
atgcctgaaccactcttcaatatgggcagattcttattgcattcactgattaaagaagtt
ccacatggcgtttccagggtccatgctttatttgctgttgcaaaacagggtaaaagtctt
ggtgcatacaaactggcaagatatgcttttgataaactgcagacacttcgtatacccgat
agatatcaggaacttattgacttgggtagcattaccattcgatcaaaaccttttcaagat
agccaggaccttcttcacatgtgctacagatgttcaacaaccaaccctctgttgaacaac
aaagggaatcaatgcatcaattgttctcaacctttcattcattcgtttattggatttgaa
acgttgccattggtggaatttgttgtcgacgatgacataagcgacgaagaagccatgaag
ttgatcaacatggacaccctagttgatgcatcacctgatcgatggcaagataacaccgct
cagcaaggaaattctcaatcgctacgtatggacggcgcagactccggtatggacgaagat
gacgatcctttcgccacaaagctaatgtcatttgagcaaggtggaggagagtacacacct
ctcgtgattggtcgaccaactttgagaaaaatacctcgtacatcagtgtttgtgaaaaag
tggccttcaccattgagatatcaattctttcgtaatatacttgatgacatctccatcaca
atgtgtcaatcatgttttaatttgttccactccgaagatttcgaacttttggtcttgcaa
caaggttactgtccattctgtcgagcgaaacaagattttatttaa
DBGET
integrated database retrieval system
