Hydractinia symbiolongicarpus: 130629103
Help
Entry
130629103 CDS
T09218
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130629103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130629103
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130629103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_2nd
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_15th
Ig_NUP210_6th
Ig_NUP210_4th
Ig_NUP210_3rd
Ig_NUP210_9th
Big_2
NUP210_Ig
Glyco_hydro_2
Motif
Other DBs
NCBI-GeneID:
130629103
NCBI-ProteinID:
XP_057298192
LinkDB
All DBs
Position
15:complement(10839607..10870702)
Genome browser
AA seq
1884 aa
AA seq
DB search
MAVKGALTLIIFFPVVFSGISPENALNVPQVLLPYVAKGSKPTTFVLKALKGCFKWSSTK
PNVAIIQPIDNKLNTSNSVDDDESSCSQSALVTVKLNSPEEDTTVILAEEEGTGFTLRCD
VFVDSIEKIEIATTTRELLLGESPEVFDVYAYDKEGNLFTALGSQIFEWSFSPVPHNDRI
DPRTVLRFIWFHDSSYETSPELYELEDQHVRGCSALVEGINTGEAIVTAKLTNAEYKTVK
PSSVMLTVIDNVMLVPPLAYIMYGQYVKYNARRLRRGEKKDISLPSQQYTIKVLDESVAS
LNQENALARGMKLGMTKIQLVDKNMADVSSARRPTANLHVVEPGKIGFAINPGKLWTLQT
QRIYELHVRLFDNDNNRIEITDDTFLTSTLFEEYFTIFKKSENGSYYHVQAKKPGKTAIT
AQTNQIRYPADEPIKMKELYGEQDIEIYDLVTVEPEFVLFPWDATLSTTQSYKYQLIGNG
GSGNYVWKSENNTFASVNKKGVISTGSAIGQTHIKVADIKNPNNFALSTVAVLPPHEMNF
IVMRVEVEVGNKMELPLTVFAFVDQDKKEKKQFSDCRKMQIDVSFSDPTVFELVKSNGEG
LLPESGCTSIYVKGLHVGHTTVTAIYTYADVTLRASVVIAAYVPVHVIDPTEFATVTLGS
RKTIVAEGGPLPWVLDSSHYYEVMSAEEDDWVQISHSKGMKDNVHNKHYFDVMCSQLGEQ
LLTVEVGNKPTAKNQYPASSSATARYLCTPPATLKMLPVITLPMIDGKRRTLESCHDDMK
RIPVRNNRELRVNVFVYDSNGNIFDDASSLQIDWSVDDSQAVLLSHKDTRYEHKEHGPLG
TNGGVQGYQMFRVHPTNVPVIITAKITGYKNKNTEHVFQISAQLHLMLFSEPKISPNNLC
LFAHPTNKLSLNVDSGTDNFVLKTNDGSLASLQFSPPDTILVTPHEEGKLTVYLHDACLD
ADGPAEAQLVFSDVYSLRLMVPDKVEVGQTIDAKCEALDQHGRVLSVADVSKQLKLQLKT
SVHIMDIRTLAPIKEIQFDVDARYNLTGKHVGLTSVMCHSSTLSGGEILSKAKEVQVFSA
IQLEPKYVLLIVGSTFQINSFGGPRPQSTTHFSISNKTVANVSQVGLVTAQVIGKTVVTG
KSKGIESVTGKEIIYSQDQTIVEVIQLKGFKILLKSRNIVNNAEIGILSVGVTDESPFTF
ATSPPYLKFHWSSSNHKVAVVESLHYKSGVGVTNDNDFRAVIRTVSPGQATIQLKVEVLS
NDHSQVTVHAQLEDRIQIQVFEKLELIYPRNGALLLPPNTQTRIQTNRDQSSRISYEVLP
NCPNSNKNRLIKISPSGQISSRSSSGTAHVMVVLHEEYGFNQTLLLQVEVKPIASITLVS
LSPFVVVSEGRPSFPIGSNALFGVTLHDNTGRLFDVANIPMKHSVSRSDVIHVVPDNENA
TYSLRGASVGEAILKVWDKENPAISDYIRVKIGAGITPAKVTVVLGAMECLTTAGKANGL
WSTPGSEVSVNQDSGVMVGMSTGSAMVYFNGNGVNTYTEVSVTPPKGLPEIIDHDNYLYV
SNAQQNRFFYVSMNSESEASRRCANTEVTSSKQIQIPFSCVAKWSDDNCDLRVTDIFDVD
GVYVNGKPACAFTTRDLSSTREKSVSTLDRNLLLAVKLVDKKSGTYYESPPAEIRFVPHV
YVEDATLNLGSGQLTQSFDLYGSDGQLSTIKATTDSSIIDVELVESYSNSRQKYKVSLLE
IPTSDTNVTVKFYSSVTRVFKTVPVSIRGEALKKGSCNVGVAKPVGTLKSFYSSIVGTDG
VWIFAYTVIIATIILILILYHAIFKGRQPAAVMVPSPYVMHHSPPPYHQYSPPYQSPGYA
SPGSYGKPNPTSTTPQRALFSVSQ
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaaagggagcgctgactctgattattttttttcctgtcgttttcagtggaatt
tcacctgaaaatgccttaaatgtgccacaggttttgcttccttacgtagcgaaaggttct
aagcctacaacattcgtgttaaaggctttgaaaggctgctttaaatggtcgtctacaaag
ccaaatgtagccatcatacaacctattgataataaattaaacacttctaactctgttgat
gatgatgaatcttcttgctctcagtctgcactggtcactgtaaaacttaacagtccagag
gaagacacaacagttattttggccgaagaagaaggaacgggatttactttacgatgtgat
gtgtttgttgattctattgagaaaattgaaattgcgacaacaacacgagaattgttgctg
ggtgaatctcctgaagtatttgatgtttatgcgtatgacaaggaagggaatttgttcact
gcactgggaagtcaaatatttgagtggagtttttcacctgttccccacaatgacagaatt
gaccctaggactgtcttaaggttcatttggttccatgattcatcatatgagacaagtcca
gagttatatgaactagaagatcagcatgttcgtggttgcagtgctttggttgaaggcatc
aatactggtgaagctattgtcactgcaaagttgacaaacgcagaatacaagactgtcaaa
ccctcaagtgtaatgttgactgttattgacaatgtcatgctggttccacccttggcatac
attatgtatggtcagtatgtcaagtacaatgcccgcaggttacgacgaggagagaaaaaa
gatatttcgctaccttcccagcaatacacaatcaaagttttggatgaatcagttgcttca
ctgaaccaggaaaatgcattggcacgtggaatgaaattgggaatgaccaaaattcagttg
gttgacaaaaatatggcagatgtatcatcagcaagaagaccgactgctaaccttcatgtt
gttgaacctggaaaaattggttttgcaatcaaccctggtaaattatggacattacaaaca
caaagaatatacgaactacacgtccgtttattcgacaatgataacaatcgcattgaaatc
actgatgatacatttctgacttcaactctcttcgaagagtattttaccatcttcaagaaa
tctgaaaacggttcttattatcatgtacaagcgaagaagcctggaaaaacggcgattaca
gctcaaaccaatcaaataagatatcctgctgatgaacctattaaaatgaaagaattatat
ggagagcaagatattgaaatttatgaccttgtaacagttgaacctgaatttgttttattc
ccatgggacgctacattgtctacaacacagagttacaagtatcagttgattgggaatggt
ggtagtggtaactacgtctggaaatctgagaacaacacttttgcaagtgtgaacaaaaaa
ggtgttatttccacaggaagtgcgataggacaaacgcatataaaagtagctgatattaaa
aatcctaataattttgctctttcaactgtggctgtgttaccaccgcatgaaatgaatttt
attgttatgcgtgtggaagttgaagttggaaataagatggaactgcctttgacggtgttt
gcgtttgttgatcaagataagaaagaaaaaaaacaattttccgattgtcgaaagatgcaa
atcgatgtgtcgttctccgatcccacagtttttgaacttgtgaagtccaatggcgaaggt
ttattacctgagagtggctgcacaagtatttatgtcaaaggtttgcatgttggtcataca
actgtaactgctatatacacatatgctgatgtaacactgcgtgcgtctgttgtcattgct
gcgtatgtcccagtacatgttattgatccaacagaatttgccactgtaactctgggttca
aggaaaaccattgtggctgaaggtggaccattgccatgggtgttggattctagtcattat
tatgaagtgatgtctgcagaggaagatgattgggtacagataagtcattcaaaaggaatg
aaagataatgttcacaataagcattattttgatgttatgtgctcccaacttggtgagcaa
ttgttgactgttgaggttggaaataaaccgactgcaaaaaatcaatatccagcaagttcc
tctgccactgcaagatatttgtgcacaccacctgcaacgttaaagatgttaccagttatc
actttaccaatgattgatggaaaaagaagaacgttggagagttgtcatgatgatatgaaa
cggattcctgtccgtaataaccgagaattgcgtgtaaatgtatttgtttatgactccaac
ggtaatatttttgatgatgcatcatctctacaaatcgattggtcagttgacgattcacag
gcagtacttttaagccacaaagatacgcgatacgaacacaaagaacatggtcctcttggt
acaaacggaggggttcaaggttaccaaatgtttcgtgtgcatcctacaaatgttccagtc
atcatcacagcaaaaattacagggtacaaaaacaaaaacacagagcatgtttttcaaatc
tcagcccaacttcacctgatgttattttcagaaccaaaaatatcaccaaacaacctgtgc
ttgttcgcacatcccacaaacaagttaagtcttaatgttgatagtggtactgataatttt
gtgttaaaaacaaatgatggcagtctggccagcttgcagttctcaccacctgacaccatt
ttggttacccctcacgaagaaggaaagttgacagtatatctacacgatgcttgtcttgat
gcagacggtcctgcggaagcacaacttgttttctctgatgtgtattctctgcggttaatg
gttccagacaaggttgaagtgggacaaactattgatgctaaatgtgaagcgttagatcag
catggtcgtgtgctgagtgttgctgatgtcagcaaacagttaaaattacaattaaaaaca
tctgttcatataatggatatcagaactttagcaccaataaaagaaatacaatttgatgtt
gatgcaagatataacttaaccggaaaacatgttggtcttaccagtgtcatgtgtcactca
tccacactctctggaggagagattttaagcaaagctaaagaagtgcaggtgttctcagct
atccaacttgaaccaaagtacgttttgttaatcgttggatccactttccagatcaatagt
tttggaggaccgcgaccacaatcaaccactcatttctcaatcagtaacaaaacagtagca
aatgtgtcgcaagtaggcctcgtgacagctcaggtgattggtaaaactgttgtgactgga
aagtcaaaagggattgaatcagtaacaggaaaagagattatttattcacaggatcaaact
atagtggaagttatccaattaaaaggatttaaaatcttgttgaagtcaagaaatattgtc
aataatgctgagataggtatcctgagtgttggcgttactgatgaaagtcctttcacgttt
gcaacatcaccaccctacttgaaatttcattggtcatccagtaaccataaagtagctgtt
gttgagtcccttcattataagtctggagttggtgttactaatgacaatgattttcgtgct
gtgattcgtacagtaagtcctggtcaggccacaatccagttaaaagttgaagtgttgagt
aatgatcatagtcaagttactgtccatgcacaacttgaagaccgcatacaaatacaggtt
tttgaaaaattggaacttatctatccaagaaatggtgctctacttctaccgccaaatact
cagactagaatacaaacaaacagagatcaatcatctcgtatcagctatgaagtattacct
aactgtccaaactcgaataagaacagactgataaaaatatcaccttctggtcagatatcc
tcaaggtcatcatctggaacagcacatgtcatggttgtgctacatgaggaatatggattt
aaccaaacactcctccttcaagtagaggtgaaaccaattgcttctatcactttggtctca
ttgtcaccttttgttgtggtgagtgaaggaagaccttcatttccaattggttcgaatgca
ctatttggtgttacgttacacgacaacactggtcgattgtttgatgtcgcaaacatccca
atgaaacacagtgtcagtagatctgatgttatccatgtagtaccagacaacgaaaatgcc
acatattctttaagaggtgcaagtgttggagaggcgatactgaaagtttgggataaggaa
aacccagctatatcagattatattcgggtaaagatcggtgcaggaattacacctgcaaag
gtgaccgtggtgctaggtgcgatggagtgtcttaccacagcaggcaaagccaacggctta
tggagtacccctggtagtgaagtatctgtcaatcaagactctggtgtcatggtaggaatg
tccactggatctgctatggtgtattttaatgggaacggtgttaacacatatacagaggtg
tctgtaaccccgccaaaaggcctaccagaaattatcgaccacgacaattatctgtacgtg
tcgaacgctcaacaaaacagattcttttatgtatcgatgaacagcgagtctgaagcgagt
cgacgttgtgccaacacagaagtgacgtcatcgaaacagatacagatccctttttcttgt
gtcgcaaaatggtcggatgacaactgtgatctgcgtgtgacggatatttttgacgtggac
ggtgtctatgtgaacggtaaacctgcgtgtgcgtttaccactcgcgacttatcgagcact
cgcgagaaatctgtgagcacgttggataggaatttacttctggcagtgaagttagtcgat
aaaaaatcgggcacgtattatgaatcgccacccgctgaaattcgtttcgttccgcatgtg
tatgttgaagacgcaaccctaaatttgggaagtggacaattgacacagtctttcgattta
tatggttcggatggacagctctccaccatcaaggcaactactgattcatctattattgac
gtcgaactggtcgagtcgtattcaaattcccgacagaagtacaaagtatcattgttagaa
attccaacatcggatactaacgtcactgttaagttctatagctctgtaacgcgagttttt
aaaaccgtaccggtttcaatccgaggagaagcgttgaagaaaggctcttgtaacgtcgga
gttgctaagcccgtcggcactttaaagtcgttttatagtagtattgtcggtactgatggc
gtttggattttcgcttacaccgtcatcatagcgactattattttgattcttattttatat
catgcgatattcaaaggacgtcagccagccgccgttatggtgccatcgccgtacgtcatg
catcactctccaccgccgtatcatcaatacagtccaccctaccaatcaccaggatacgcg
tcacctggttcgtacggaaaaccaaacccgacatcaacaactcctcaacgtgcgctgttc
agtgtgtcgcaataa
DBGET
integrated database retrieval system
