Hydractinia symbiolongicarpus: 130644363
Help
Entry
130644363 CDS
T09218
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130644363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
betaPIX_CC
Nas2_N
Motif
Other DBs
NCBI-GeneID:
130644363
NCBI-ProteinID:
XP_057305913
LinkDB
All DBs
Position
5:5447497..5455220
Genome browser
AA seq
500 aa
AA seq
DB search
MDSSKGYNIQTLIQVPVRLICALCGLILRNTIQTSRGERACSTCYNEAVRKPGLCPIDGE
EPTEIFKDKYADKEIGEIECYCTNKSNNCNWIGPIKLLEQHFEECEFNVVPCSKCNEDVL
RRDLATHERQLCVKRTIHCPYCGITLSHDLYQEHEPICPDRPKMCPMNCGKGLTDGHQNH
LLECSNIRNGQACVYQLLGCNYKGGQSVLDHKNETHLLHDVVTVTSISQLQHDNFTLQKA
VQESSDKIAVLEERHLLDQQAIMHQREEVNSLKNDVKKLQKKYEEQMLLVLEKVNNLDRK
VNEHENPTSEGITQALKECNEKVERLDNSQTMLSSNLSDLDLRQQLLENTCYNGRMLWKI
DNLEYRMKQAVDGKVTALHSAPCFTKKFGYKFCTRLYLNGDGIGRDSHVSLFFVLMRSEY
DALLEWPFREKVTFRLLSANDVRGLDIRETFLPDRTSTSFQKPVREMNVAAGCPTFITID
ELKSGKYIIGNSIFIETVVG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggattcaagcaaaggctataacatacaaacactcattcaggttcctgtacggttgatt
tgcgctttgtgtggactcattttgagaaacaccatccaaacaagtcgtggtgaaagagct
tgtagcacttgctacaacgaagctgtccgtaaacctggcttgtgtccaattgatggtgaa
gaaccaactgaaatttttaaagataaatatgctgacaaagaaattggtgaaatcgaatgt
tattgcaccaacaaaagtaataactgtaactggattggtcctataaaattacttgagcaa
cattttgaagaatgtgaattcaatgtcgtgccatgctccaaatgtaacgaagatgtattg
aggcgtgacttggcaactcatgagcgtcaattgtgtgtcaaaagaaccatccactgtcct
tactgtggtatcactctttcacatgatctctaccaggagcatgaacctatttgcccagat
agaccaaaaatgtgtccaatgaattgtggaaagggtttaacagatgggcatcaaaaccat
cttttggaatgtagtaacattaggaatgggcaagcctgtgtataccagcttcttggttgc
aattacaagggtggacaatcagtccttgatcataagaatgagacgcatctgctacatgat
gtggttacagtgacatcaatttcacaacttcagcacgacaattttaccctacaaaaagca
gtgcaggagagtagcgacaagatagctgttttagaagagagacatctacttgaccagcaa
gcaattatgcatcaaagagaagaagtaaattcacttaaaaatgatgtaaaaaaacttcaa
aaaaagtacgaggagcaaatgttgttggtgctggaaaaagtgaacaatttggatagaaaa
gttaacgagcatgaaaatccaacttctgagggaataacccaagctttaaaagagtgtaat
gaaaaagtagaaagattagataatagccaaacaatgttaagctcaaatttgtcagattta
gacttgcgtcaacagctgctagagaacacatgttacaatggtcgaatgctttggaagatt
gacaatctcgaatatagaatgaagcaagcagtagatggcaaagtgactgccttgcacagc
gctccatgtttcacaaagaaatttggatataagttttgcacaaggctttatctgaatgga
gatggaattggaagagattcacacgtatctctctttttcgtactcatgagatcagaatac
gatgctttgttggaatggccattccgtgaaaaggttacttttcgcttgttaagtgcgaat
gatgtgagagggttagatattagagaaacatttttgcctgatcgtacttcaaccagcttt
caaaagcctgttcgcgaaatgaatgttgctgctggctgtcccacttttattacaattgat
gagttaaaatctggaaaatatattataggcaacagtatatttattgaaactgtagtaggg
taa
DBGET
integrated database retrieval system
