Hydractinia symbiolongicarpus: 130649448
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Entry
130649448 CDS
T09218
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
hsy
Hydractinia symbiolongicarpus
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsy03036
]
130649448
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130649448
Chromosome and associated proteins [BR:
hsy03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130649448
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
130649448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
HATPase_c
SMC_hinge
Motif
Other DBs
NCBI-GeneID:
130649448
NCBI-ProteinID:
XP_057311704
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All DBs
Position
7:complement(7751356..7778085)
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AA seq
1990 aa
AA seq
DB search
MMSTNGMMDSPPGVSLFKDNDSYVSTPPREHKVLLSHESVDKIVRLSPDWSYGRFMKKVA
SLFPALKKKFTLIDADFQELDEKGFASLKTSTMRETWLLVRERESNDESSNSHSIVLEKP
RYELLKYDVHPNALTQSGSYHFSECYQAFCEFIDNAVQATNSNSSAEGRNINLYIFLKQR
IACIFDNGSGMTSEGMKAFASYFLSQQDRGLEKEPGSTYGFMDGNISKFGVGATQAGFYL
GETIKVVTKKTDSPFVTEISISKKKLHERAKYSLPVFEDYKCIRSPGDNRTLEDDEKCLS
DLVKMETSFDHFSMVIIKDVHSKHVDYMSEDCCDDLAKNLAHVYHYYLHGIHGRLNKLEF
DRITTNGLHQSTKQNVSIKVIVNELGVSPKEIIVNQIKNDLQSLYQAKMKSVFSFCLELK
LAENSTPQVVQGCLMYFPNESGEETLPNANEEHVNSNTPEPMFECFWQGRLAPLSYVNRL
DFCLKPENRTRKQKDLLPDICFKRLRGLLFFNRCTPVSNNKLKILLDTRRDLSDALSDAS
ASRRLPHEFRQWLEQCHREFDCEIIYEHPLPDAQQPHDGNKFYAQIIMITSSGKVVYTSG
DTVKIDTRPVLYGQAKYFIKKEKATEVGSIIFTKLPEEVYGDMYDERPVMRLAGKPDATM
LNKVFSAERMLLPKMIRVYQGVNKTEEVPSKMEFRAGEEMKQYTNFWVSVYNGESPAKVI
TEIHKRKIAVQVKATGRNPLTNSLPIENRFGFKSFYLDKVGVYDVVFTALLGGTPCNVEK
KLEINMLPNFAEIVNLLENSPELVGLGEKVISFTLSFHDVFENYTTLFKDNQKTVKLTCS
CEHLIIKGLKESYKPNKDGKLTVSGISVEPEAGYQLSLSRDYEFWVVAEGIGDVMFPFRL
ITGPAEKIKTTQLETLEFENYSNFPEFEVKILDKWNQPAITQDKSHRLALTCDAFPQKTL
FSTISNGKAKFPTSAIKVEGLKSMETRQVKISLVVSETHKKKLTIKNVLKEFSVVNIRVT
PSNVCQKILVTEKGKDVVLDDNHFTTDATAGSVVRHLKVVGFSENGKRLTDEEFVAQEPK
VSATWAEVNSKLLPLLPDCPVSNIIQMNVHNVQCICHYNGFEIRNEAKLRISVTAGEPRK
WSFQPLTLQVGCGKKKNLREAVKIIVLDSHHNQTTPNSNILPIINVQHNEKNETVVYNGE
VVLEKNEFRFTTDSILSGHVGQVTLSVQDEENRLSKDSIALQLDSGHASQLTLTCTSFGE
ELTDDGEHVLHMHYNSTLPSHLFCSIRDEFGNSTPTKTAVALVWKPKNTGSDSSKKSNAK
GEVIFQSHQIKCLAKSGDVRIKLSTPEVTSIKPSWIRIKVLQCNKVTKVILSFLNPTKVT
AADGLPVISISHETEDGVTAQDFKNNISLDITHPLGDNIDPLKLYPVKLRTIKNGVLICK
PIEKFQLQKTGTWRFQCEYTEKRSEIVNIVSNVRLKSDVLQLLVFAGPAVKLSLSIKEDT
CLFASSTADIRGRTLLPIQTKGSTTHASIFASDVFGNAVSYNKLVNLWVEACEATKDVIL
PQLEKMCTSFMMKGLETHLSQISLMERIGNKIGFYYLVFSSPPLEPCRVKFSFSTNEEFE
KVSQELVPYQRELEIVRRELKEKQDLHIMRKNDVNRIKQSVQTFFSGAQPSVQDIDIQIA
KVRNSYYEVELREQHLRQGRKDANYPPYNVRQYIKGLVCELAYVSDENLCRILSWYAQSK
MKVALCETREQQRKVYDLGCPAYSESLIVGFNRRGHNTQDTDLLPIDLPRPPNGFRSQID
FAVNLLEFTEENRHLRSTLYWSVFSRTIVVSDLEQAQRYREHVVKLKQPCPAILTLTGDL
IASDGLMDPSRKCPPKMTMLRYTFGELPLKQRNEFQTLQTSLHTLEELRRARVNADVAGE
TVKQCQIELRQKDALLSPKIQELQKRLDAIRKSTDAIRKSTDLTRKGTDLTRKSTDSTRK
AYSPPKKKRR
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaactaatggaatgatggactctcctcctggtgtatccttgtttaaagacaat
gattcctatgtctccacacctccacgcgaacataaagttcttctttctcacgagtctgtt
gacaagatagtacgcctatcccctgattggtcctatggaaggtttatgaagaaagtagca
tcattatttccagccttgaagaagaaatttacgttaatagatgctgattttcaagaattg
gatgagaaaggcttcgcatctttaaaaacatctaccatgagagaaacgtggcttttagtg
cgagaaagagaatctaatgatgaaagttctaatagtcattcaattgtattggaaaaacca
cgttatgaacttttaaaatatgacgttcatcccaacgcattgacacaaagtggtagctac
catttttccgaatgttatcaagcattttgtgaatttattgacaatgctgtacaagcaaca
aacagtaattcaagtgcagaagggcgaaatataaacctgtatatattcctaaaacagaga
atagcttgtatatttgacaatggtagtggtatgacatctgaagggatgaaagcattcgca
agttactttctgtctcaacaagatagaggcttagagaaagaaccaggctcaacatatggc
tttatggatggcaatatttctaaatttggagttggtgccactcaagcaggtttttatctt
ggtgaaacaatcaaagtggtcacaaagaagacagattcaccatttgtgactgaaatttct
atttcaaagaaaaaactacatgagagagcaaaatatagtctgcctgtttttgaagattac
aaatgcatacgtagtccaggtgacaaccgtactcttgaagatgatgagaaatgcttatct
gatctggtgaaaatggaaacatctttcgaccatttctctatggttataattaaagatgtc
cattcaaagcatgttgactacatgtccgaggattgttgtgacgatctagctaaaaattta
gcacatgtttatcattattatttgcacggtatacacggcaggttaaacaaattggagttt
gaccgaatcacaaccaatggtcttcaccaaagtacaaagcaaaacgtatcaatcaaagta
atagttaatgaacttggtgtgtcaccaaaagaaataattgtcaatcaaataaagaatgat
ttgcaaagtttatatcaagctaaaatgaaatctgtgttttctttttgtcttgaactcaaa
ctggcagagaatagtacaccacaggttgtacaaggatgtttgatgtactttcccaatgaa
tctggagaggagacacttccaaatgcaaatgaggagcatgttaacagcaatacaccagaa
cctatgtttgaatgtttttggcaaggacgtttagctccattgtcttacgtaaatagattg
gatttctgtttgaaaccagaaaatagaacgagaaaacaaaaagatttactgcctgacatt
tgctttaaacgattacgtggcttgttgttttttaatcgatgtacacctgtatcaaataac
aaattaaagattttgctcgacaccaggagagatttgtcagatgctctgagtgatgcttct
gcatccaggcgattaccacatgaatttcgtcagtggcttgaacagtgccacagagagttt
gactgtgagattatctatgaacatccactacctgatgctcaacaaccacatgatggaaat
aagttttacgcacaaattattatgataactagctctggtaaagttgtgtacacatcaggt
gatacggtaaaaattgatacacgacctgttctttatggtcaagctaaatattttatcaaa
aaagaaaaagctactgaagttggatcaatcatttttactaaacttcctgaagaggtgtat
ggagatatgtatgatgaaagacctgttatgagattggctggaaaaccagatgctaccatg
ctaaataaagtatttagcgctgaacgaatgcttttgcctaaaatgataagggtttaccaa
ggtgtcaacaaaactgaggaggtgccatcaaaaatggagtttagagcaggagaggaaatg
aagcaatacacaaatttttgggtatctgtttataatggtgaaagtccagcaaaagtgatc
actgaaatacataagcgaaagatagcagtgcaagtgaaagctactggaagaaatccttta
acaaatagtcttccaattgaaaacagatttggattcaaatcattttacttagacaaagtt
ggagtgtatgatgtagtttttactgcgctgcttggtggaacaccatgtaatgttgagaag
aaactggagataaatatgttgccaaattttgcagaaattgtcaaccttttggagaattct
cccgaactagttggactgggagagaaagtaatatcttttaccttatcctttcatgatgta
tttgaaaactacaccacactgttcaaagacaaccaaaagactgtcaaattaacatgctct
tgtgagcatttgattataaaaggtttaaaagaatcatataaaccaaacaaagatgggaaa
ctgacagtctctggtataagtgttgaaccagaggctggatatcagttaagtttatccaga
gattacgaattttgggtagtggctgaaggaattggtgatgtcatgtttcccttcagatta
ataacaggccctgctgaaaagattaaaaccacacagctagagacacttgaatttgaaaac
tacagtaactttcctgaatttgaagtgaaaatactagataaatggaaccagccagccatt
acccaagacaagtcacatcgtttagcactaacatgtgatgcctttccacagaagacactt
ttttcaactatttctaatggaaaagccaaatttccaaccagcgccataaaggttgaaggt
ttaaaaagcatggaaactagacaagttaagatatcactagtagtttcagaaactcacaaa
aagaaattgaccatcaagaatgtgttaaaagagttttcagtagtaaatattagggtcact
ccgagcaacgtttgtcaaaaaatcttagtgacagagaaaggtaaagatgttgttctggat
gacaatcacttcacaactgatgctacagcaggatcagtagtaagacatttgaaagtagtt
ggattcagtgaaaatggaaaaaggttaacagatgaagaatttgttgcacaagaaccaaag
gtatcagctacctgggcagaggtgaactcaaaattattgcctctattaccagactgtcct
gtctccaatattatccaaatgaatgtacataatgtgcagtgcatttgtcattacaatggt
tttgagattcgcaatgaagccaaactgagaatctcagtcactgctggagaaccaagaaaa
tggtcctttcaaccacttactcttcaagtgggatgtggaaagaaaaagaaccttcgtgaa
gcagtaaagatcatagtgttggatagtcatcacaaccaaacaacaccaaacagtaatatt
ctacctatcattaatgttcaacataatgaaaagaacgaaactgttgtgtacaatggtgaa
gttgtgttggagaagaatgaatttagattcacgacagattccattttatctggacatgtc
ggtcaagtcaccctaagtgttcaggatgaagagaatcgattatctaaagactccatagca
ttacaacttgacagtggacacgcgtcccaattgacactcacttgtacatcatttggtgaa
gaactaacagatgatggcgaacatgtgttgcacatgcattacaattcaacattaccctct
cacctattttgctccataagagatgagtttggcaacagcacaccaactaagacagcagtg
gcactggtgtggaaaccaaaaaatactggaagcgattccagcaaaaagtcaaatgcaaaa
ggagaagttatttttcaatcacatcagatcaaatgtttggcaaagagtggggatgtgagg
attaaattaagcacaccagaagttacttccattaagccttcgtggatacgaatcaaagtg
ttacagtgtaacaaagtcacgaaagtcattctttcctttttgaatcctaccaaggttact
gctgctgatggactaccagtaatttctatttcgcatgaaacagaggatggagtgacagct
caagacttcaaaaataacattagcttagacataacacaccctcttggagataacatagac
ccgctgaagctatatccagtgaaactacgcactattaaaaatggtgttctaatttgtaaa
ccaattgaaaaattccaattgcagaagactggaacatggcgttttcagtgtgaatacaca
gaaaaaagatcagaaattgttaatattgttagtaatgtgcgtctgaaaagtgatgtgttg
cagcttcttgtattcgcaggtccagcagttaagttgtcattaagcattaaagaagatact
tgcttgtttgcatccagtaccgcagatattcgtggtagaacgctgttgcctatccaaaca
aaaggttctaccacacatgcttccatatttgcatcagatgtgtttggcaatgctgtcagc
tataataaattggtcaatttgtgggttgaagcatgtgaagcgacgaaagatgtgatcttg
cctcaactggagaaaatgtgcacgtcttttatgatgaaaggattggaaactcatttgtca
cagatttctttgatggagaggattggaaacaagattggtttctactatcttgttttctct
tcaccacccctggaaccgtgccgagtgaagttttctttcagcacaaatgaagagtttgaa
aaagtatctcaagaattggttccttaccaaagggaacttgaaatagttcgtagagaactc
aaagaaaagcaagacctgcatatcatgcgaaagaatgatgttaatcgtatcaaacaaagc
gtacaaaccttctttagtggagcacaaccgagtgtacaagatattgatatacagattgca
aaagtgcgaaatagctactatgaggtcgaacttcgtgaacaacatttaaggcagggtaga
aaggacgcaaactatccaccttataatgtgcggcaatacataaaaggtttggtgtgtgaa
ttggcgtatgtttctgatgagaatttgtgtcgtattctatcatggtatgctcaaagtaaa
atgaaagtcgccctgtgcgaaacgcgagaacagcagcgtaaggtgtacgatttaggctgt
ccagcttacagtgagagtttaattgttggttttaacaggagaggacataatacgcaagat
acagatctgttacccatagatttgcctcgcccacccaatggttttcgcagtcaaatcgat
tttgctgttaatttactggagtttacagaagagaaccgtcatttgcgttcgacgttatat
tggtcggtgtttagtcgtacgattgttgtgtcagacttagaacaagctcagcgctaccgc
gagcatgttgtgaagttaaaacaaccatgcccggctatattgacgttgaccggtgatttg
atagcctcggacggattaatggatccgtctcggaagtgcccgccaaagatgactatgtta
aggtacacgttcggtgagttaccgctaaaacaacgaaacgagtttcaaacattgcaaact
agtttacatactttagaggaactacgacgagcaagggttaacgctgatgtagcaggagaa
actgtaaaacaatgtcaaatagaactgcgccaaaaagacgcactcctaagtccgaaaata
caagaacttcaaaaaagattggacgcaattcgcaaaagcacggatgctattcgcaaaagt
acggatttaacccgaaaaggcacggatttaacccgaaaaagcacggactcaactcggaag
gcatatagtccaccaaaaaagaaaaggcgatga
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