Hydractinia symbiolongicarpus: 130655383
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Entry
130655383 CDS
T09218
Name
(RefSeq) RING-box protein 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03420
Nucleotide excision repair
hsy04120
Ubiquitin mediated proteolysis
hsy04141
Protein processing in endoplasmic reticulum
hsy04310
Wnt signaling pathway
hsy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130655383
04120 Ubiquitin mediated proteolysis
130655383
09124 Replication and repair
03420 Nucleotide excision repair
130655383
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130655383
04350 TGF-beta signaling pathway
130655383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsy04121
]
130655383
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130655383
Enzymes [BR:
hsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
130655383
Ubiquitin system [BR:
hsy04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130655383
Multi subunit type E3
SCF complex
Ring finger protein
130655383
Cul2 complex
130655383
Cul3 complex
130655383
Cul4 complex
130655383
Cul7 complex
130655383
Cul8 complex
130655383
Cul9 complex
130655383
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
130655383
TCR (transcription coupled repair) factors
Cul4-CSA complex
130655383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
130655383
NCBI-ProteinID:
XP_057314118
LinkDB
All DBs
Position
8:26695399..26699778
Genome browser
AA seq
110 aa
AA seq
DB search
MADADIEMSESSSSTTTVKDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQA
NQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWELQKYGR
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcagatattgaaatgtctgaatctagcagttctacaaccacggtaaaagat
aaaaagagatttgaagtgaaaaagtggaatgcagttgcattgtgggcctgggatattgtt
gttgacaattgtgccatctgcagaaatcatatcatggacctatgtattgaatgccaagct
aatcaagcatcagcaactagtgaggaatgcacagtagcttggggtgtatgcaaccatgca
tttcattttcactgtatctcgagatggttgaaaacaagacaagtatgtccattagacaat
cgtgaatgggagttacaaaagtatgggcgctga
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