Hibiscus syriacus (Rose-of-Sharon): 120126932
Help
Entry
120126932 CDS
T09559
Name
(RefSeq) ABC transporter I family member 21-like isoform X1
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120126932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120126932
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120126932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
NACHT
AAA_28
AAA_5
SMC_N
AAA_15
AAA_23
AAA
AAA_25
ATP-synt_ab
AAA_22
AAA_30
AAA_18
Arf
AAA_24
Zeta_toxin
SRP54
PduV-EutP
AAA_33
AAA_16
Motif
Other DBs
NCBI-GeneID:
120126932
NCBI-ProteinID:
XP_039000898
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MLYWLNLNNNKGIKMAAKRCKEPRTSTKMAEQACCRSGEEKENGESKGISVCGMQFAYEL
QHPLFFDFNLDITRGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNRSAFHDTQL
VCSGDLAYLGGSWSKTIGSAGEVPLQGDFSAEHMIFGVEGIDPARRDHLIELLDIDLQWR
MHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARMDLLDFFKEECEQRGATIVYA
THIFDGLEKWATHLAYIQDGQLKRSGKLTETNELKISENLLSVVEAWLRSETKSEKKKPS
QVQKSSPCGTSPFMSSRHMSYYR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgctctactggctaaatctcaacaacaataagggtattaaaatggccgcgaaaagatgt
aaagaaccgcggacatctaccaaaatggcggagcaagcttgttgcagatcaggagaagag
aaagaaaatggagaatcgaagggcatcagcgtatgcggcatgcaattcgcatacgaattg
cagcatccgctcttcttcgatttcaatctcgatatcactcgtggatctcgttgccttctc
gtcggtgccaacggatctgggaagacgacgttgttgaaaattttagcaggaaagcatatg
gtcggtggaagagatgttgtgagagtacttaaccgttcggcttttcacgacactcaactt
gtttgtagcggtgacttagcttatttgggagggtcttggagtaaaactattggctccgct
ggggaggttccattgcagggggatttctcagcggaacacatgatatttggagttgaaggg
attgatcctgcgaggagagatcatttgattgagttacttgatattgatttgcaatggcga
atgcataaggtatctgatgggcaacggcgtcgagtccaaatttgtatgggtcttcttcat
ccttttcaggttcttttgctagatgaggttacggtggaccttgatgttgttgcaaggatg
gatttacttgatttctttaaggaagaatgcgaacagagaggagccacgatcgtatatgct
acccacatttttgatgggttggagaaatgggcaacacatctggcttacatccaagatggt
caattgaagagatccgggaagttaaccgaaacgaatgagttgaaaatctcagaaaatttg
ctgtctgtcgttgaagcctggcttcgctctgaaaccaagtctgagaaaaagaaaccttct
caagtccagaaatcctcgccttgcggaacttctcctttcatgtcgtcgaggcacatgtca
tactaccgttga
DBGET
integrated database retrieval system
