KEGG   Hibiscus syriacus (Rose-of-Sharon): 120128951
Entry
120128951         CDS       T09559                                 
Name
(RefSeq) 5'-3' exoribonuclease 4-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    120128951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120128951
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     120128951
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC zf-CCHC_5
Other DBs
NCBI-GeneID: 120128951
NCBI-ProteinID: XP_039002484
LinkDB
Position
Unknown
AA seq 933 aa
MGVPAFYRWLADRYPQSIADVIEEEPREDAKGNQIPVDVSKANPNGLEFDNLYLDMNGII
HPCFHPDGKPAPATYDDVFKSIFDYIDHLYSLVRPRKLMYMAIDGVAPRAKMNQQRTRRF
RAAKDAAEAAAEEERLREEFEAERKALSPMEKPETCDSNVITPGTPFMAVLSVALQYYIQ
SRLNRNPGWRTTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADLIML
SLATHEVHFSILREVITLPGQQEKCFLCGQVGHLAAECHGKQDNGNGEGNAVDDTPIHKK
KYQFLNIWVLREYLQYDLEIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA
INLLMQVYRKEFASIGGYLTDAGEVLLDRVECFIQSVSVYEDQIFQKRTRIQKAYENNEQ
MKLKARGEGSEEAQAPVVDKIKLGEPGYKERYYAEKFNVSNQGEIEEVKRDVVLKYLEGL
CWVCRYYYQGVCSWQWFYPYHYAPFASDLKDLTDLEITFFMGEPFKPFDQLMGTLPAASS
KALPEEYGKLMTEPSSPISSFYPFDFEIDMHGKRFAWQGVVKLPFINEWKLLAATRKLEA
TLTVEEHFRNSVMHDLLYVHPHHPLASQVISYYYQFSPHKKNEWPINANASGGMNGFLWL
TERNGWKSVVSSPVKELPHIEYNHVINVTYLNPSCHKHIPELPQGVVTPKKILTPLDIKP
FPVLWHEDNGGRRQQVRDRSWVPGAIIGPQLGEAAHRLVKNTLNIKSNGSSSGLFEQPSF
NISSNYTSIKQRPAGPSGYERGFFDDSSLSYSSRPLAAGSPGYGRGYGDGPNYYSQHNHL
HGIMASPRHTSSNGMQVNRDNFRAQERSHYQEHYNDLRTGMSAFSFEGSGRGRTQVEMSS
RMPNSGYTNAPPPVPPPTKWINMPENVNTGTYN
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgggagttccagcgttttacaggtggttagcggatcggtacccgcaatcgatcgcggat
gtgatcgaggaagaaccgagagaagacgctaagggaaatcaaataccagttgacgtctct
aaggctaaccctaacggcctcgaattcgataatctttatctcgatatgaacgggattatt
cacccttgttttcacccggatggcaagcctgcacctgccacttatgatgatgtttttaaa
tctatctttgactatattgaccatctttattcattggttcgtcctagaaagcttatgtat
atggcaattgatggcgttgcacctagagctaaaatgaatcaacaacgtactcggcgcttc
agagctgcaaaagatgctgccgaggctgcagctgaagaagagagattgagggaagagttt
gaggccgagaggaaagctttgtcccctatggaaaaacctgaaacatgtgactctaatgtt
ataactcctggcactccatttatggctgttttgtctgtagcacttcagtattacatacaa
tctaggttgaatcgtaatcctggctggcggactacaaaggttattctttctgattcaaac
gttcctggagagggagaacacaagatcatgtcatacatcaggttacaacgtaaccttcct
gggttcaatccaaacacacgacactgtttgtatggtctggatgctgatttgatcatgttg
tccttagccacccatgaggttcacttttcaattttaagagaggtgatcactcttcctggg
caacaagaaaaatgttttctatgtggtcaagttggtcatctggcagccgagtgtcatggc
aagcaagataatggaaatggagaagggaatgctgtggatgatacaccaattcacaagaag
aaatatcagtttcttaacatatgggtgttgcgagaatatctgcaatacgatttggagatc
cccaaccctccctttgagataaactttgaacgaattgtggatgattttgtttttttatgt
ttctttgttggtaatgacttccttccacatatgccaacattagaaatcagggagggtgct
ataaatctcctgatgcaagtatatagaaaggaatttgcttctataggtggttatcttact
gatgcgggtgaggttttgttagatagagtggaatgttttattcaatctgtttctgtttat
gaagatcaaatctttcagaagaggactcgtatacagaaggcatacgagaataatgagcaa
atgaagcttaaagcaagaggagaaggctctgaggaggcacaggcacctgttgtagataag
attaaattaggggaaccaggatacaaagaaagatattatgctgagaaattcaatgtatca
aaccaaggggagattgaagaagttaaaagagatgtcgttttgaagtatcttgaaggttta
tgttgggtgtgccgctattactaccaaggtgtttgctcttggcaatggttttatccatat
cattatgcgccatttgcttcagatcttaaggatcttactgacttggaaataacatttttc
atgggagaaccatttaagccatttgaccagctcatgggaactctgccagctgccagttct
aaagctttgccagaagaatacgggaaactgatgacggaaccatcatcacctatttctagt
ttctacccctttgattttgagattgatatgcatggtaaacgctttgcatggcagggtgtt
gtcaagttgcctttcatcaatgagtggaagttgcttgctgcaacaagaaagcttgaagct
actttaactgtagaagagcattttcggaacagtgtgatgcatgatctgctatatgttcat
cctcatcatcctttggcttcacaagttatttcatactactatcagttctcccctcacaaa
aaaaatgaatggccaattaacgcaaatgctagtggtggaatgaacggatttctttggtta
actgaaaggaatggttggaaaagtgtagtgtcttcccctgttaaggagttgccacacata
gaatataaccatgttataaacgttacttaccttaatccttcatgtcataaacacattcca
gaacttccacagggtgttgtgacacccaaaaagattctaacccctctagacattaaacct
tttcctgtattatggcatgaagataatggagggcggcgtcagcaagtcagagatcggtca
tgggtacctggagcgatcattggccctcaactaggagaggcagctcatcgtcttgtcaag
aacacacttaatatcaaatcaaatggctcatcgtctgggttgttcgagcaaccatcgttt
aacatctcgagcaactacacaagcattaaacaaagacctgctggaccatctggttatgaa
aggggcttttttgatgactcaagtctttcttatagtagtcgaccacttgcagctggatct
ccaggttatggaaggggatatggtgatggcccaaattattatagtcaacacaaccatcta
catggcataatggctagcccacgacatacctcatcaaatggtatgcaagtcaacagagac
aacttccgggcgcaggaaagatcacattatcaggaacattataatgatttgaggactgga
atgtctgctttctcatttgagggaagtggcagaggtagaacacaagtagagatgtcttca
aggatgccaaattctggatataccaatgctcctcctcccgttccccctcctaccaagtgg
atcaatatgccggagaacgtaaacactggaacttacaattaa

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