Hibiscus syriacus (Rose-of-Sharon): 120140186
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Entry
120140186 CDS
T09559
Name
(RefSeq) nuclear pore complex protein GP210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120140186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120140186
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120140186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_5th
Big_2
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_9th
Ig_NUP210_16th
Motif
Other DBs
NCBI-GeneID:
120140186
NCBI-ProteinID:
XP_039011130
LinkDB
All DBs
Position
Unknown
AA seq
1957 aa
AA seq
DB search
MLMPKMIRFNILLLFTVSFTVVTGTTSHSSSGPHIADVNILLPPKMTNPVEYRLQGSDGC
FKWSWDHHEILSVLPEYNVTNPCSTSARLRSIAPYSGRKETAVYARDVNTGIVIRCKVFI
DNFDRIQIFHNSIKLDLDGLATLRVRAFDTEDNVFSSLVGLQFMWKLMPKTSGLSHHLAH
VPLKDSPLSDCSGLCGDLDIQIQLEEKGVFSDLFVVKGIHIGHENVSVQLFEPPLEAMDD
TIVLTVAEAMSLYPPSPVFVLINATLRYSLKVIRGNVPQEITLPSPHHRWSVSNSSVARV
DFTMGVIHALTLGGTTVIVEDTRVDGHSQMSSLKVVLPDTLSLYISLLSSGDPVEGMQPI
PPMARWYVVSGKQYLIQLKVFSRGPYAHEIYITENDDIEFYDNQSGYWKIVPVLEPTASR
YSLRSARILEATSEGLGKLTASLVYYNGHHDTKEVLKVVQEVIVCDQVKFSLEKVSDESQ
IVLLPWAPALHQEMELKAAGGCAKASSDYKWFSSDITVVSVTAYGVVQAKKPGKATVKVV
SSFDSFNYDEVMVEVSTPSYMVMLQNFPVETVVGSHIPAAVTMKTSNDAYFSRCDAFHSF
IKWKVGSESFIVTNGTGEASVLGKKDNLELHVPVDGPPCSWTYIYASASGQAMLHATFSK
EYHHFDPSFSGPIVLRAASRIASYRPLTLHQVGDGNQFGGYWVNTTGAEASNQLEDQDKV
YLVPGTQLDVMLYGGPERWDEGVGFVEKVEIFDEKRAHVDGVLVHQTSSSHGSLYRLLCQ
TLGTFKLVFKRGNLIGDFHPLPTLEEASLSLVCSLPSSIVVIVDEPVNDRDVIRTKIQVD
HSPGQIQVTPVTVANGQTIRVAAVSISTNGEPFANSSSLCLKWELGNCDSLAYWNHVYYS
ENHNNSSWERFLVLQNESGSCIVRATVIGFTGSSTAHLYSSELPEDLGNFLTDAVQIQLV
STLRVTPEFNLLYFNPDAKANLSITGGSCFWEAVVNDSHVVEVTQSPPGLQCLQLMLSPK
GLGTAVVTVYDIGLTPNLVASVVVQVSDIDWIEIMSGEEISLMEGSSKSIGLMAGVDDGS
TFDIPQFSYMNIHVHIEDVIVELVDKDDFSSPNGGYVSMQNFKIRAKHLGITTLYVSARR
HFGHEILSQAIKVEVYAPPTIHPPNIFLVPGASYLLTIKGGPTLGAFVEYTSTDDAIATV
DKTSGRLTATSPGNTTLIAKVYGNGDDVICQAYSSVKVGVPSSAILNVQSEQLAVGRETP
IYPIFSEGDLFSFYGLCKDYEWTIENEEVLTFGVPLVGSEAVQRFSYVDKEKLSFINVLY
GRAPGRTNIAVSFSCDFISSGSHLEARTYNASLSLLVVSDLPLALGAPITWVIPPHYTTS
SILPSSTESRGQKDSQSRKGSIIYSLLRNFEEGTEVSQRAVSIDGDKIKTEESNNLACIL
AKDRITGRAEIASCVRVAEVEQIRITIKEFPVHAIDLAVGAEIELSTSYYDALGNPFYEA
SNVILHHAETNSPDVISVNSTHDTNIIHLKAMRHGRALLKVSIDNRPQKSDYMLISVGAH
VQPQNPILHQGSSINFSVVGCDDQASGHWYSVNESVIVFHTRSGQAEAVGEGSTQVVYFK
SSDVKLQTTVTVLPGSTLVVDAPKEMLTNVPFPSQGFSFSVKFSDANDKINTIGSSEGAP
YDCRVDPPFVGYAKPWVDIDTGNSFCLFFPYSPEHLVRTAPKLKNMKPYIYVSINASLKE
HSHVSGSASALFVGGFSIVQMGKDTTQLNLTPDSNKTIITILGNTDVEIHWHGQGLLTIN
PIHEEGFGAARSIQYEVKASSAKQFTDKIIVTLPSTGQRVELDVNYEPDEKPEPKAPINI
SFWAKVLGSLALTIITVIVGFICLSDRPLGSSQPPSTPQPTSVISAPVTPDRRSPLRFDE
QSPRTPQPFVDYVRRTIDETPYYRREGRRRFNPQNTY
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgccaaagatgattcgcttcaatattttgcttcttttcaccgtttcgtttacg
gtggtgaccggaacgacgtcgcattcgagctccggtcctcatatagccgacgtcaacata
cttttacctccgaaaatgacgaaccccgtcgaataccggcttcaagggagtgacggctgt
ttcaaatggtcgtgggatcatcatgagattttatcagttctgccggagtataatgtgacc
aatccttgctcgacaagtgctcggctgagatcgattgcgccttactctggtagaaaagaa
actgcggtttacgctagggacgtcaacactgggatcgtaatacggtgcaaggttttcatc
gataattttgatagaattcaaatatttcataattcaattaagcttgatcttgatggtctc
gctactctccgagttcgtgcctttgatactgaagacaatgtgttttcctcattggtgggt
ttacaattcatgtggaagctgatgcctaaaactagtggattgagtcatcaccttgctcat
gttcccttgaaagattctcccttaagtgattgtagtggactatgtggtgacttagatatt
cagatacaacttgaagaaaagggtgtattttcggatttatttgttgtaaaaggcattcat
atcggccatgagaatgtttcagtacagttgtttgagccaccgttagaggctatggatgat
acgattgttctaactgttgcagaagctatgtcactatatccaccatcacctgtttttgtc
cttattaatgctactcttcgttatagtcttaaggttatccgtgggaatgtccctcaagag
ataactcttccatcaccacatcatcgatggtctgtatcaaacagttcagttgctcgagtg
gactttacgatgggtgtcattcacgcgttaacgttgggtggaacaactgtcattgttgaa
gataccagagttgatggccatagtcaaatgtcatctcttaaggtggtcttgccagatacc
ttatctttgtacatttcactattgtctagtggagatccagtagagggaatgcaacccatt
ccgcccatggcacgttggtatgttgtctctggaaaacaatacctcattcaactcaaggtt
ttttcccggggtccgtatgcacatgaaatctacattacagagaatgatgatattgagttt
tatgataaccaatcgggctactggaaaattgtcccagtgttagagcctactgcatccaga
tacagcttgaggagtgctagaattttggaagcaacttcagaggggttggggaaattgaca
gcctctttagtttactataatggacatcatgatactaaagaggttctcaaggttgtgcaa
gaggttattgtttgcgatcaagtaaagtttagcttggaaaaagtaagcgatgaatctcaa
attgttctccttccttgggcacctgctctacatcaggagatggagctaaaggctgctgga
ggttgtgcaaaagcctcaagtgactataaatggttttcttccgacattactgttgtttcg
gtaactgcatatggagttgtccaagcgaagaagcctggtaaagctacagtgaaggtggtg
tcaagttttgattcgttcaactatgatgaggtcatggttgaagtttccactccatcctat
atggttatgttacaaaacttccctgttgagactgttgtgggatcacatatcccagctgct
gttacaatgaaaacttcaaacgatgcctacttttctagatgtgatgcatttcattccttt
ataaagtggaaagttggaagcgagtctttcattgttaccaatggaacaggggaggcatca
gtccttggaaagaaagataatttggagctccatgtacctgtggatggtcctccatgttca
tggacatacatatatgcttctgcatctggtcaagcaatgctgcacgcaacattttcaaag
gaataccatcattttgatccctcttttagtgggcctattgttctaagagcagcttctaga
atagcatcatacagaccactaactctgcatcaggtaggtgatgggaaccagtttggtggt
tactgggttaatacaactggtgctgaagcgagtaatcaactagaagatcaggataaggtg
tatcttgtgcctggaactcagttagatgttatgctttatggaggaccagaaaggtgggac
gaaggtgttggctttgtggaaaaagtggagatttttgatgaaaaacgggcacatgttgac
ggggttcttgtgcatcagacttctagcagccatggcagtttgtatagacttttatgccaa
acattggggacttttaaacttgtttttaaacgtggaaatttgattggagattttcatcct
cttcccacattagaagaagcttcactctctcttgtttgcagccttccttcctctattgtg
gtaatagtggatgaacctgttaatgatcgagatgttattcggactaaaattcaagttgat
catagcccagggcaaattcaagtcacacctgttactgtggcaaatgggcaaactattaga
gtggctgctgtcagcattagtaccaatggagagccttttgcaaactcttcttccctgtgc
ttaaagtgggagcttggcaattgtgacagtctggcttattggaaccatgtttattattct
gagaaccataataattctagttgggagaggtttctggtcctgcaaaacgaatcaggatcg
tgtattgtccgtgccactgttattggatttactggtagttccacagctcatctttattct
tctgagttgccagaagatttagggaattttcttacagatgctgtacaaatacagcttgtt
tctactctaagagtaactccggagttcaatttgttatatttcaatccggatgccaaggca
aatttatcaattactggagggagctgtttctgggaagctgttgtgaatgattctcatgta
gttgaagttactcagtcaccacctggtttacaatgcttacaactgatgttatcaccgaaa
ggcctgggaactgccgttgtgacagtttatgatattgggctgactcctaatcttgtggct
tctgtcgtggtccaagtttcagatatagactggattgagattatgtcaggagaagagata
agccttatggagggaagttcaaagtcaattggtttgatggcgggggttgatgatggaagc
acttttgacattcctcagttttcttacatgaatatccatgtgcatattgaggatgttata
gtggaacttgtggacaaggatgacttctcaagccctaatggtggatatgttagcatgcag
aatttcaaaatcagggcaaaacatcttggtatcacaactctttacgtcagtgctagacga
cattttggacatgaaatattgagtcaagctatcaaggttgaagtttatgctccaccaaca
attcacccaccaaatattttccttgtaccaggtgcctcttacttgctcactataaaagga
ggtccgacccttggtgcctttgtggaatatacaagtacagatgatgccattgcaacagtg
gacaaaacttcagggcggttgactgcaacttcacctggaaacactactttgattgccaaa
gtttatgggaatggtgatgatgtgatttgtcaagcatatagcagtgttaaagtgggagta
ccatcttcagcaatattgaatgtacaaagtgagcaacttgctgttggccgtgagacacca
atttatcctatattttctgagggagacctgttttctttctatgggctatgcaaagattat
gagtggactatagaaaatgaagaggtgttaacgtttggggtcccactggttggttcagag
gcagttcagcgctttagttatgtggataaggaaaaacttagttttatcaatgtcctgtat
ggaagggcccctggaagaacaaatattgcagtttcattttcatgtgattttatctcttct
ggttcacacttggaggcaaggacttacaatgcatccctctccctattagtggtgtctgat
cttcccctggcacttggagctccaattacatgggttattcctccccattataccacatct
agcatcttgccttcatcaacagagtcacgtggacaaaaagatagtcagagccgcaaagga
agcataatatattctttgttaagaaattttgaggaaggaacagaggtttcacagcgtgct
gtttccattgatggtgacaaaataaaaacagaagagagcaataatcttgcttgcattcta
gccaaagatcgcatcactggaagagctgagattgcttcttgtgtccgggttgctgaggtg
gagcaaataagaataacaatcaaggagtttccagtccatgcaattgatctcgctgttggt
gcggaaattgaactttcaacaagctattatgatgctctagggaaccccttttatgaggca
tctaatgttattctccaccatgctgaaactaattctccggatgtaatctctgttaacagt
acccacgataccaatattattcatctaaaggcaatgcgacatggtagagctcttctaaag
gtatcaattgacaatcgtccacaaaagtcggactatatgctgatttcagtcggtgcccat
gtgcagccccaaaatcctatcctccaccaggggagttctattaacttcagtgtagtaggc
tgtgatgatcaagcttcaggtcactggtatagtgtcaatgaaagtgttatagttttccac
actcgatctggacaggcagaagctgttggggagggatcaactcaagtagtttatttcaaa
agttccgatgtgaagctgcaaacgacagtcacagttctacctggaagtactcttgttgtg
gatgctccgaaggagatgttgacaaatgttccttttccctctcaaggatttagcttttct
gtgaagttcagtgatgcaaatgacaagatcaacaccattggaagcagtgagggagctcca
tatgattgtagggtagaccctccttttgtcggctatgcaaagccttgggtggatattgat
actggtaattcattttgcctattcttcccttactctccagagcatttggtccgcaccgca
cccaagttgaagaacatgaaaccttatatttatgtttccatcaatgcttcattgaaagaa
catagccatgtttctggatccgcatctgcactttttgttgggggattttccatagtgcaa
atgggaaaggatacgacacagttgaatctgacaccagactctaacaagactatcataacc
atcttgggaaatacagatgttgaaatccactggcatggtcaaggtttgttaacgattaat
cccatccatgaagaaggatttggtgccgctcgcagcatacagtatgaggtaaaagcatcg
agtgccaagcaattcacggataaaatcattgtcacactcccgtctactggtcaaagagtg
gaattggatgttaactatgaaccggatgagaaacccgaaccaaaagctcctattaatatt
tccttttgggcaaaggtcttgggaagtcttgccctaacaataatcacagtgattgtcggc
ttcatatgtttatccgaccgacctcttggatcatctcagccaccatccactccacagccc
acttcagtcatatcggcacctgtcacgcctgaccggagaagtccccttcgtttcgatgaa
caatctccacggacaccacaaccatttgtggattatgtgaggagaaccatcgatgagact
ccgtactatcggcgagaaggcaggaggaggtttaatcctcagaacacgtactga
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integrated database retrieval system
