Hibiscus syriacus (Rose-of-Sharon): 120158288
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Entry
120158288 CDS
T09559
Name
(RefSeq) transcription factor APG-like
KO
K12126
phytochrome-interacting factor 3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
hsyr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120158288
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120158288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsyr03000
]
120158288
Transcription factors [BR:
hsyr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120158288
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Paralog
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NCOA
DUF4554
Motif
Other DBs
NCBI-GeneID:
120158288
NCBI-ProteinID:
XP_039025093
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MTHHLPNLPSTCYPDAAELVRENGQILIRGLSSKKPGKKNITCLQTGHQELRLHELYEDG
YDKQVVAANKFNVPQLEEEEEIVPQQTMNNDRKVPQSCYKQQSKEKIKSRIDEESEKVRK
SLEKEWVPDEQSEAAPSKGSTRKRKPESHSLSERRRREKINKKMRALQELIPNCNKMDKA
SVLDEAIEYLKTLQLQVQMMSMGSSGVYMPPMMLPAPSMQHINARPLVGCYSPMAVAMQM
AQFPSTSSLIPAINQARLNMLGLSGQVLLTSMPPLRSPFVSLAAARFPQLPVQTPTVSRT
SGPAVTLSKSMEWNRTR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacacatcacttgcctaatttaccatccacgtgttatcctgatgcggcagagctggtg
cgggaaaatggtcaaattttgattcgaggtttatcgtccaagaaacccggaaagaagaac
ataacttgtctgcaaaccgggcaccaggagctacggttgcatgaactatacgaggatggt
tacgataaacaagttgttgctgcaaacaaattcaacgtgccccagctagaagaggaagaa
gagattgttcctcagcaaaccatgaataatgataggaaggtgcctcaatcttgctacaag
caacaatcaaaggagaaaatcaaatcaaggattgacgaagaaagtgaaaaggtgagaaaa
tccctcgagaaagagtgggttcccgatgaacaatccgaagccgctccgagcaaaggctca
acgagaaagagaaaaccagaatctcacagcctatctgaaaggagacgaagagaaaaaatc
aacaagaagatgcgtgccttgcaagagctcatacccaactgtaataagatggataaagct
tcggttcttgatgaggcaatcgagtacttgaaaacccttcagcttcaagttcagatgatg
tcaatgggaagtagtggtgtttatatgcctccgatgatgttacctgctccatcgatgcaa
catataaatgcacggcccttggttggttgttattctcccatggctgtcgcaatgcagatg
gcacagtttccatcgacatcttcactaattccggcgatcaaccaagctagactcaacatg
cttggcctctctggtcaggtgctattaacgtccatgccgccattgcgatcacctttcgta
tcgttggctgctgcgagatttccccaactaccggtccagacccccaccgtatcccgaacc
tccggccccgctgttactttgtctaaatcgatggaatggaatcggacacgttaa
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