Hibiscus syriacus (Rose-of-Sharon): 120163899
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Entry
120163899 CDS
T09559
Name
(RefSeq) transcription factor PIF3-like isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04075
Plant hormone signal transduction
hsyr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120163899
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120163899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsyr03000
]
120163899
Transcription factors [BR:
hsyr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120163899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
120163899
NCBI-ProteinID:
XP_039029638
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MPLYELYRMARGKLDSSQDKKNPSSSTDLSSVPENDIVELVWENDQVSMQGQSSRARKMI
SCSDKDIGNGGDFTRMGKFGVLDSSILSDVPMSVVPTHGADDEVVPWLKYPEVQSLHDEC
SGLLPELSGLASNEIPTNSNVASFDRRRQSVRDLFTVSTNDAVDFERGKLLKVPKPADDK
ARPSQPRQVSSPYFRSRNSESIGNNLSHTLTNHAICRDSMGVQPSDDALAGIKLQKQDPG
APCSNTLLMNFSHFARPAAIVKTNLKNIGAMARTEKNGSKEKGIGDGVSNCVDSRHIDSN
IELQKEELSHCHSTMLPMKTDIKESKAKSLDSPGDKISNQVTGENASKRLPHSDKAVESV
HAASSVCCGNSVERSSDDTLLHNLKRKNRDDDEFECPSEDAEEESEGVKKAIPAQGGKGS
KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM
SMRAGLYMPPTMFPTGMQHMHAAHMAHLSSMSVGMGIGMGFGMPFPQTNTIVSACPMVQV
PPTPGAPLSGPCPGPHPSGTTTLQEMTGSNLQPYGFHGHGLPMSMPGVPLIPIPIQNINS
QVTENTNINSSVNQVTENTNINSCVNQTSTQCQTTNESFEQPAEVHKNSQASEITGSVPF
RSTEGDEKLPDRS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtatgagctatatcggatggctagggggaaacttgattcatctcaagacaag
aagaacccttcaagctccactgatttgtcttctgtacctgagaatgacattgttgaattg
gtatgggaaaatgatcaagtttcaatgcaaggtcagtctagtagggctaggaagatgatt
tcttgtagtgataaagatataggaaatggaggggattttacaagaatgggaaagtttggg
gtgttggactcttctatattgagtgatgttccgatgtcggtggtgccgactcatggtgct
gatgatgaagtggtgccttggctgaagtaccctgaggttcaatctttacatgatgaatgt
tctggtttattgcctgaactatccgggctcgcttcgaatgagatcccgactaatagtaac
gtagcatcatttgatagaagacgccaatccgttagagatttgtttactgtttctacaaat
gatgctgtggattttgaacgaggaaagctgttgaaggttcctaaacctgcagatgacaaa
gctaggccatcacagccacgtcaagtgtcttctccgtattttagatcaagaaattcggag
agtattggtaataacctgagccataccttaaccaaccatgccatttgcagagattcaatg
ggagttcaaccatcagacgatgctttggctggcataaagttgcagaaacaagatcctggt
gcaccttgtagtaatacactgttgatgaatttttcccatttcgcacgtcccgctgctatt
gttaaaactaatcttaagaacataggtgctatggctaggactgagaagaatggaagtaag
gaaaaggggattggtgacggtgttagcaactgtgttgattccaggcacattgattcgaat
attgagctacagaaggaagaactttctcattgccattctacaatgttgccaatgaagacc
gatataaaagaatctaaagctaaatctctagattcaccaggtgataaaatctctaatcaa
gttactggtgaaaatgcttctaaacgcctgccacatagtgacaaggctgtagagtctgtg
catgctgcttcctctgtttgctgtggaaatagtgttgaaagatcatctgatgatacatta
ttacacaatttgaagagaaaaaatcgtgatgatgatgagtttgaatgccctagtgaagat
gctgaagaagaatctgagggtgtgaaaaaagcaattcccgctcaaggtggtaaggggtct
aagagaagtcgagcagcagaagtgcataatttatctgaaaggaggcgaagggataggata
aacgagaaaatgcgtgccttacaggagctcataccaaactgcaacaaggtggacaaagct
tcgatgcttgatgaagcaattgaatatcttaaaacactccaactacaggtgcagattatg
tctatgcgagctgggttatatatgccaccgacgatgtttccaactggaatgcaacatatg
catgcagctcatatggcacatttatcatccatgagtgttggaatgggtataggtatgggt
ttcgggatgccatttcctcaaacgaatactatagtttctgcttgccctatggttcaggtg
cctccaacccctggagcacctctttctggcccctgccctggcccacatccatccggcacc
actacactccaagagatgacaggatctaacctacagccgtatgggtttcatggtcatgga
cttccgatgtcgatgccaggtgtacctttgattcctattccaattcagaatatcaactca
caagtgacagagaacactaacatcaatagctccgtgaatcaagtgacagagaacactaac
atcaatagctgcgtgaatcagacatctactcagtgccaaacaacaaatgaaagttttgaa
cagccagctgaagtgcacaagaatagtcaagcctcagaaatcaccggtagtgttcctttt
agatcaacagaaggagatgagaagttacctgataggtcatag
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