KEGG   Hibiscus syriacus (Rose-of-Sharon): 120168944
Entry
120168944         CDS       T09559                                 
Name
(RefSeq) DNA repair protein RAD16-like
  KO
K15083  DNA repair protein RAD16
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120168944
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      120168944
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 DEAD zf-RING_2 ResIII zf-C3HC4_4 Prok-RING_4 zf-C2HC_2 TPR_NUP160_120_M RING_XB3-XBAT31 zf-Di19 zf-RING_6 zf-rbx1
Other DBs
NCBI-GeneID: 120168944
NCBI-ProteinID: XP_039033125
LinkDB
Position
Unknown
AA seq 887 aa
MKLRSRKRISNLSDSDEHSDPSDKPDGPIMLASLSDSEIYVPSSDSDIGEDEILDLNHKT
RKPSRITVYDFVEPSTNRGNDEQELPEQNEVSGDFNVSSPKKRKNAKRRKRKKSGEVLMW
EVWEEEHEKWVDENLTVDVDLDQQNAVITETSEASSDLIIPLLRYQKEWLAWALKQEDSE
IKGGILADEMGMGKTLQAIALVLAKRQFLHEIGDPNGSSVTSGSSTDLPRIRCTLVICPV
VAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNMKLFSEYDFVITTYSIVESEYRKFMMPP
KSKCPFCGKSFQEKKLSVHLKYFCGPDAVKTLKQSKQESKKSKSMLKSGREHASNYDTDS
RKKGSKKKAKHIEEDKDVEYEFNGTSADIEHSLPQGKAPLHSVKWERVILDEAHFVKDRR
SNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRILDYGTS
RECSNCPHSSVRHFCWWNKYVATPIQNHGNGEIGKRAMILLKHKILKNIVLRRTKKGRAA
DLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQ
AVDHPYLVVYSSTAAQRAGSIANCDRNNDEQVCGICNDPAEDPVVTACEHVFCKACLIDF
SASVGHVSCPTCSRLLTVDLTTNADAGGQSCRTTLKGFKSSSILNRIQLNDFQTSTKIEA
LREEIRFMVERDGSAKGIVFSQFTNFLDLIRYSLHKSGINCVQLIGSMTLGARDAAIKSF
TEDPDCKIFLVSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPIRIVR
FVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFVT
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgaagcttcgatcgcggaaaaggatctccaacctctctgacagtgatgagcacagcgac
ccttctgacaaacccgatggtcctattatgttggcctctctctcagactcagaaatatat
gtgccttcgtccgactctgatataggggaagatgaaattttggacttaaatcataaaaca
aggaaaccttctcgtatcaccgtttatgattttgttgagccttcaacaaacagaggcaac
gatgagcaggaattgcctgagcaaaatgaagtcagtggtgactttaatgtgtcgagccca
aagaagagaaagaatgcaaaaaggagaaagagaaagaagtccggggaagtgttaatgtgg
gaagtttgggaagaagagcatgagaaatgggttgacgagaatttgacagtagatgttgat
cttgatcaacagaatgcagtcataaccgagacttctgaggcatcttccgacttaattatt
cctttgttgagataccaaaaggaatggttggcctgggctctgaagcaggaagactccgaa
atcaaagggggaatccttgcagatgagatgggaatggggaagacgcttcaagcaatagcc
cttgtccttgccaaacggcaattcctccatgaaatcggcgatcccaatggttcatcagtg
acctcaggttcgtcaacagatttgcccaggatcagatgcacccttgttatttgtccggtt
gttgctgtgagtcagtgggtaagtgagattgatcggtttacttctaggggaagcactaag
gtgttggtttaccatggtgccaacagagggaaaaatatgaaactgttctcagagtatgat
tttgtaataacaacttattctattgttgagtccgagtataggaaattcatgatgccgcca
aagagtaaatgcccattctgtgggaagtcatttcaggaaaagaagctctctgttcactta
aaatatttctgtgggcctgatgctgttaaaacattaaagcagtctaaacaagagagtaag
aaatcgaaatctatgcttaagtcaggcagagaacatgctagtaattatgatactgattcg
agaaagaagggtagcaagaagaaagcaaagcatattgaggaagacaaagatgttgaatat
gagtttaatggaacttctgcagacatagaacatagcttgcctcaaggaaaagcacctcta
cattctgtaaagtgggagcgcgtcatcttggatgaggctcattttgtgaaagatagacgt
tctaatactgcaaaggctgttctttccttggaatccttgtacaaatgggctttgagtggc
actcctctacagaatcgtgttggagaactatactctttggttcgtttcttgcaaatagtt
ccatactcctattacttgtgcaaagattgtgactgcagaattcttgattacggtacatca
agagaatgttcaaactgcccccatagttctgtgaggcacttttgttggtggaataagtat
gtcgctacaccaatacaaaatcatggaaatggtgagattggaaaaagagctatgatattg
ctaaagcacaaaattttgaagaacattgtcttaagacgtacgaagaaaggcagggccgct
gatcttgcccttcctcctagaattatctcattaaggcgggacaccatggatattaaagaa
acggactattatgaatcattgtacagtgaaagtcaggcacaatttaacacatatgttcaa
gcaggaactgtaatgaacaattatgctcacatttttgacctcctcacacgcttgcggcag
gctgttgaccacccttaccttgtggtatattcgagtactgctgcacaaagagctggaagc
atagcaaactgtgataggaataatgatgaacaagtatgtggcatttgcaatgaccctgca
gaagatccagtggttaccgcgtgtgaacatgtcttctgcaaggcttgtctgattgatttt
tctgcctccgtgggacatgtctcatgccccacttgctcaagattacttactgttgatctg
actacgaatgcggatgctggagggcaatcttgtaggacaacactgaagggatttaaatcc
tcaagtattctaaacaggatacaattaaatgattttcagacaagcacgaaaatagaggct
ttgagggaagaaatcagattcatggtggaaagagatggctctgccaaaggaatagttttt
agccaattcactaatttcttggatctcataagatactccctccataagtccggcataaat
tgtgttcaactgatagggagcatgaccttgggtgcacgagacgctgcaatcaaaagtttt
actgaggatccagattgcaagatatttctcgtgagtttaaaagctggaggggttgccctt
aatctcacagttgcatcacatgttttcttgatggacccttggtggaacccagccgtggag
cgccaagcacaagatagaatacaccgaatagggcaatgtaaaccgataaggattgtcaga
tttgttattgaaaacaccatagaagagaggatattaaagctgcaagagaagaaggaattg
gtattcgaagggaccgtgggtggctccacagaggctctaggaaaattgacggaggcagac
atgagatttctatttgtcacttga

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