Hibiscus syriacus (Rose-of-Sharon): 120168944
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Entry
120168944 CDS
T09559
Name
(RefSeq) DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120168944
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
120168944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
DEAD
zf-RING_2
ResIII
zf-C3HC4_4
Prok-RING_4
zf-C2HC_2
TPR_NUP160_120_M
RING_XB3-XBAT31
zf-Di19
zf-RING_6
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
120168944
NCBI-ProteinID:
XP_039033125
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MKLRSRKRISNLSDSDEHSDPSDKPDGPIMLASLSDSEIYVPSSDSDIGEDEILDLNHKT
RKPSRITVYDFVEPSTNRGNDEQELPEQNEVSGDFNVSSPKKRKNAKRRKRKKSGEVLMW
EVWEEEHEKWVDENLTVDVDLDQQNAVITETSEASSDLIIPLLRYQKEWLAWALKQEDSE
IKGGILADEMGMGKTLQAIALVLAKRQFLHEIGDPNGSSVTSGSSTDLPRIRCTLVICPV
VAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNMKLFSEYDFVITTYSIVESEYRKFMMPP
KSKCPFCGKSFQEKKLSVHLKYFCGPDAVKTLKQSKQESKKSKSMLKSGREHASNYDTDS
RKKGSKKKAKHIEEDKDVEYEFNGTSADIEHSLPQGKAPLHSVKWERVILDEAHFVKDRR
SNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRILDYGTS
RECSNCPHSSVRHFCWWNKYVATPIQNHGNGEIGKRAMILLKHKILKNIVLRRTKKGRAA
DLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQ
AVDHPYLVVYSSTAAQRAGSIANCDRNNDEQVCGICNDPAEDPVVTACEHVFCKACLIDF
SASVGHVSCPTCSRLLTVDLTTNADAGGQSCRTTLKGFKSSSILNRIQLNDFQTSTKIEA
LREEIRFMVERDGSAKGIVFSQFTNFLDLIRYSLHKSGINCVQLIGSMTLGARDAAIKSF
TEDPDCKIFLVSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPIRIVR
FVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFVT
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgatcgcggaaaaggatctccaacctctctgacagtgatgagcacagcgac
ccttctgacaaacccgatggtcctattatgttggcctctctctcagactcagaaatatat
gtgccttcgtccgactctgatataggggaagatgaaattttggacttaaatcataaaaca
aggaaaccttctcgtatcaccgtttatgattttgttgagccttcaacaaacagaggcaac
gatgagcaggaattgcctgagcaaaatgaagtcagtggtgactttaatgtgtcgagccca
aagaagagaaagaatgcaaaaaggagaaagagaaagaagtccggggaagtgttaatgtgg
gaagtttgggaagaagagcatgagaaatgggttgacgagaatttgacagtagatgttgat
cttgatcaacagaatgcagtcataaccgagacttctgaggcatcttccgacttaattatt
cctttgttgagataccaaaaggaatggttggcctgggctctgaagcaggaagactccgaa
atcaaagggggaatccttgcagatgagatgggaatggggaagacgcttcaagcaatagcc
cttgtccttgccaaacggcaattcctccatgaaatcggcgatcccaatggttcatcagtg
acctcaggttcgtcaacagatttgcccaggatcagatgcacccttgttatttgtccggtt
gttgctgtgagtcagtgggtaagtgagattgatcggtttacttctaggggaagcactaag
gtgttggtttaccatggtgccaacagagggaaaaatatgaaactgttctcagagtatgat
tttgtaataacaacttattctattgttgagtccgagtataggaaattcatgatgccgcca
aagagtaaatgcccattctgtgggaagtcatttcaggaaaagaagctctctgttcactta
aaatatttctgtgggcctgatgctgttaaaacattaaagcagtctaaacaagagagtaag
aaatcgaaatctatgcttaagtcaggcagagaacatgctagtaattatgatactgattcg
agaaagaagggtagcaagaagaaagcaaagcatattgaggaagacaaagatgttgaatat
gagtttaatggaacttctgcagacatagaacatagcttgcctcaaggaaaagcacctcta
cattctgtaaagtgggagcgcgtcatcttggatgaggctcattttgtgaaagatagacgt
tctaatactgcaaaggctgttctttccttggaatccttgtacaaatgggctttgagtggc
actcctctacagaatcgtgttggagaactatactctttggttcgtttcttgcaaatagtt
ccatactcctattacttgtgcaaagattgtgactgcagaattcttgattacggtacatca
agagaatgttcaaactgcccccatagttctgtgaggcacttttgttggtggaataagtat
gtcgctacaccaatacaaaatcatggaaatggtgagattggaaaaagagctatgatattg
ctaaagcacaaaattttgaagaacattgtcttaagacgtacgaagaaaggcagggccgct
gatcttgcccttcctcctagaattatctcattaaggcgggacaccatggatattaaagaa
acggactattatgaatcattgtacagtgaaagtcaggcacaatttaacacatatgttcaa
gcaggaactgtaatgaacaattatgctcacatttttgacctcctcacacgcttgcggcag
gctgttgaccacccttaccttgtggtatattcgagtactgctgcacaaagagctggaagc
atagcaaactgtgataggaataatgatgaacaagtatgtggcatttgcaatgaccctgca
gaagatccagtggttaccgcgtgtgaacatgtcttctgcaaggcttgtctgattgatttt
tctgcctccgtgggacatgtctcatgccccacttgctcaagattacttactgttgatctg
actacgaatgcggatgctggagggcaatcttgtaggacaacactgaagggatttaaatcc
tcaagtattctaaacaggatacaattaaatgattttcagacaagcacgaaaatagaggct
ttgagggaagaaatcagattcatggtggaaagagatggctctgccaaaggaatagttttt
agccaattcactaatttcttggatctcataagatactccctccataagtccggcataaat
tgtgttcaactgatagggagcatgaccttgggtgcacgagacgctgcaatcaaaagtttt
actgaggatccagattgcaagatatttctcgtgagtttaaaagctggaggggttgccctt
aatctcacagttgcatcacatgttttcttgatggacccttggtggaacccagccgtggag
cgccaagcacaagatagaatacaccgaatagggcaatgtaaaccgataaggattgtcaga
tttgttattgaaaacaccatagaagagaggatattaaagctgcaagagaagaaggaattg
gtattcgaagggaccgtgggtggctccacagaggctctaggaaaattgacggaggcagac
atgagatttctatttgtcacttga
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