Hibiscus syriacus (Rose-of-Sharon): 120207015
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Entry
120207015 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120207015
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120207015
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120207015
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
120207015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c_3
HATPase_c
EzrA
GAS
Motif
Other DBs
NCBI-GeneID:
120207015
NCBI-ProteinID:
XP_039062472
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MENDSHFKGLKRRLALDDGHSDVVLRRFRVLLPNGTSVGLTLKDDLDHEISFQGFIDMIR
DAYDMEKRQSGSFKSKGTINWKSKRLYLEDVNGSETMGRIDLRRFKLHKCHFLQLHDGSG
EVTNNFENMWDLTPDTDLLMELPEEYTFETALADLIDNSLQAVWLNRETHRRLISVDVLE
NRISIFDTGPGMDNSDXNSIVKWGKMGASLNRLYKVKAIGCKPPFLVPFFGMFGYGGPVA
SMHLGSCVIVSSKTKESKKVYKLRLARDALLSNAGSECSWRVDGGFRDPSDDEIVKSPHR
SFTKVEILKSKVKNLDISKLQCKLKDIYFPYIQCDELSEGGKTVTPVEFQVNGVDLAEIQ
GGEVATTNMHSCNGPEFTVSLHFSLKKENASPNASGSKAPRMANARLKFIYFPIRQGKEN
IERILESLEDEGCGVREKFDNYSRVSIRRLGRLLPDARWVLLPFMDLRQRKGENYQLLKR
CCLRVKCFVDTDAGFNPMPSKTDLAHHNPFSIALKNFSSRPKDKEKDVNVEIHRDGKQLT
YLQLEREYMDWLLQMHHMYDEEIESGEDQPTIVVSPLNKKALGISSDVIRVHQILKRKGL
LWKSGQKIKVLKGACAGCHKNNVYATIEHFLLEGFQGDSGGEARIICRPLGVENGCKLSV
KGGTPNLDIQDSLSLPISVIDSQKCMPIDDSDWELQLKKQIQKNPSRIELLNAKQCHQLE
VDGALPTDLPIHAGETPPNVIVAVFRPSSFTFSLASNYLDQKDIVKVNLEMSMEVTFRRT
KNHQDVELIYSVRIALSSLKGFHGLYMFPLGVTFRHLFQKAGAYTFSFSAEHSGCPNYKQ
TIMVVPSEKVGKWELLRGEKFPSYTSRVGSCFPPLSLACYDIYDNQMSFTSIPILKIKLI
MNEDLCIDVVKMKPSLSSDNSVFIIKDVVIECDELDAIRPNYAATLMIYIQDESTTVSVE
CHVTPGDLHSIKVCSELPRKRLLPGFVVEQFLLEVFDVYGNHVEEGLEVQFQLDGFSIQG
QIGSSFKVDNQGCIDLGGLLKVTTGYGKQASLSVLHDDEVIFKQDFQTXERELRISSSVP
EQCIAGSSLENIGFEVVDSNGDVDKTFHDDGKCGQSHTLVVKSESFEVDDSIRYVFKQGR
YNISSFPCPQIEGPLCFKAFHSRYSQLYCDVKICLVHAPIVDNSEVEVHASDGKISLHAP
KVENSELESDTSGGKVLFLQNSPFVNNGNVGNLLSIVKYDKELESEVLKYAERVGKRENY
LRGLNCWKTGIEHKISRLQASLEPDLVNNLDCLSTKEELMKLIEGRGHTAAATLCSLAQG
PPMHITEHVVGVVALLGTVFSVELSRILAEYLGEDQMLAVVCKFYHSAAALEQYGHNGEV
DSKFGLHAEATALGKSLSGRFLVVCLEDIRPYPGGVDFNDPQRKLVLPIPSLSFGHQPPG
FIGYAVNMINLDNSDYRTDSGHGLRETLFYRLFGKVQVYDTREHLEKARNCIEHGAVSLD
GGIMRKNGLISLGFRSPEIYFRVENRYVSPQSKNVMDQIKEKQTELTTTLQKIDKSNEKL
KRDLLRLDKKKTKLRVYMDNTDYAINNIVTMSPLQYSQELGTPSQSTPRHMSPLQYTQEL
GTPPQSTPRHMSPLQYTQELGTPSQSTPR
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgactcacatttcaagggtctgaagaggcggttggccttagacgatggacat
tccgatgtcgttctccgacgtttcagagttctgttacccaacgggaccagcgttggtttg
acgttgaaagacgatctcgatcatgaaatctcatttcagggcttcattgacatgatcagg
gacgcctatgatatggagaaacgacaatccgggtcgtttaaaagtaaaggaacgataaac
tggaagagtaaaaggttgtatcttgaggacgtaaatgggtcggaaacaatgggacggatc
gatttgcggcgcttcaaactccataagtgtcactttcttcaacttcatgatggttctgga
gaggttaccaataattttgagaatatgtgggatttgactcccgatactgatttgttaatg
gagctaccagaagaatacacttttgaaactgctcttgctgatttgattgacaattccttg
caagcagtttggttgaaccgtgaaacccataggagattgataagtgtggatgttcttgag
aatagaatctcaatatttgacacggggcctggaatggacaacagtgatngaaactctatt
gtgaagtggggaaagatgggtgcctctctaaacaggttatataaagtaaaggcaataggg
tgcaaacctccattcttagtgcccttttttggcatgtttggatatggaggacctgttgca
tctatgcatctaggaagctgtgttatagtttcgtccaagacaaaagaatcaaagaaagtt
tataagttacgtcttgcacgagatgctttactcagcaatgctggttctgaatgtagttgg
agggttgatggcggctttagggatccttctgatgacgaaattgtgaaatcaccccatcgg
agctttacaaaggtggagatactaaagtctaaagtgaaaaacttggacatatctaagctc
caatgtaagctgaaggacatatactttccgtatattcagtgtgatgagttgtccgagggt
ggcaagaccgttacacctgttgagttccaggttaatggtgtcgatttagctgaaattcaa
ggtggcgaagttgcaaccacaaacatgcattcgtgcaatggtcctgagtttactgtatca
ctgcacttttcccttaaaaaggagaatgcttcacccaatgcttcaggttctaaggctcct
cgaatggcaaatgctcgcctcaagtttatttattttcccatccgtcaggggaaagagaat
attgagaggattttggagagtttggaagatgaaggatgtggagttagagaaaaatttgac
aactatagtcgtgtctcaatccgtcgacttggacgtctacttccagatgctcgttgggta
ttacttccttttatggatttgaggcagagaaagggagaaaactatcagttgttgaaaaga
tgttgcttgagagttaaatgctttgttgataccgatgccggattcaatccaatgccttca
aaaactgatttggctcaccataatcctttctccattgctcttaagaactttagtagtagg
ccgaaggacaaagaaaaagatgtcaatgttgaaattcatagagatggaaaacagttgaca
tatttgcaactggaaagggagtacatggattggcttcttcaaatgcatcatatgtatgat
gaagaaatcgagtctggtgaagatcaacctaccattgttgtcagtcccttgaacaagaag
gcactaggaatatcatctgatgttataagagttcatcaaattctgaagagaaagggatta
ttgtggaaaagtggccagaaaatcaaagttctcaagggtgcatgcgcagggtgtcataag
aacaatgtttatgcaacgatagaacatttcttgcttgaaggatttcagggggattctggg
ggagaagctcggattatatgcaggccactaggtgtggaaaatggatgtaagctttctgta
aagggtggaactcccaatttggatattcaggactcactatcgcttccgattagtgtgatt
gattctcaaaagtgcatgcccattgatgattctgattgggagctccaacttaagaaacaa
attcagaagaatccctcaagaattgaattgctgaacgcgaaacagtgtcatcagttggag
gttgatggggcattgccgactgatcttccaatacatgctggagaaacccctccaaatgtc
attgtggctgtttttcgtccaagtagtttcacattttctcttgcttcaaattacttggac
cagaaggacattgtgaaggttaatttggagatgtcaatggaagtcacatttagaagaacc
aagaaccatcaagatgttgaactcatttactctgttcgcattgcactttcatccttaaaa
gggtttcatggattgtatatgttcccactcggggtgacgttccgtcacttatttcagaaa
gcaggtgcatatacattttcattctccgctgaacattcgggttgtccgaattacaaacaa
acaattatggtagtgccttcagaaaaggttggaaagtgggagcttcttcgtggtgagaag
tttccatcatatacttcaagggtcggttcatgttttccacccttatctcttgcatgctat
gacatctatgacaaccaaatgtcatttacctccattcctatcctaaagatcaagctcatc
atgaatgaagatttgtgtattgatgtggtcaagatgaagccttccctttcatctgataat
tcggtctttattattaaggatgttgtgattgaatgtgatgagttagacgcaatccggcca
aattatgcagccaccttgatgatatacattcaagatgagtcgacaacagtttctgtggaa
tgtcatgttacccctggagatctacactctatcaaagtctgttcagaacttcccagaaag
cgattactcccaggctttgtagttgagcagtttttgctagaggtgtttgatgtgtacgga
aatcatgttgaagaaggcttggaagtccaattccagttggatggttttagcatccaaggt
caaataggctcgagctttaaggtggataaccaaggatgcattgacctagggggcctattg
aaagtaaccacaggttatggaaaacaagcatctctctctgttttacacgatgatgaagta
attttcaagcaagattttcaaactngagaaagggagctcagaatatcatcaagtgtaccg
gagcaatgcattgctggttcctcactggaaaatataggttttgaagttgtagactccaat
ggggatgttgataaaacatttcatgatgatggaaagtgtggccaatcacatacgctcgta
gttaagtctgaatcatttgaagtagacgattctatacgctatgtgttcaagcaaggccgc
tacaacatctcttcttttccctgtcctcaaattgaagggcccctttgcttcaaagctttt
cattctcgttactctcagctatattgcgatgttaagatttgtcttgtacatgctccgata
gtcgataacagtgaggttgaggtccatgcttcagatggaaagatttctcttcatgctccg
aaagtcgagaacagtgagcttgagtcagacacttcaggtggaaaggtcttattcctgcaa
aactcaccattcgtcaacaacggcaatgtaggaaacctactgtccattgtgaaatatgac
aaggaactagagagtgaagtgctcaaatatgctgagcgtgtgggaaaaagggaaaattat
ctaagaggtcttaattgttggaagacaggcatcgagcacaaaatttctaggttgcaagct
tctcttgaacccgatttagtgaacaatctggattgcttgtcaacaaaagaagaactaatg
aaactgatcgagggaagaggtcatactgcagctgctactctctgcagtcttgctcaagga
ccaccgatgcatatcacggaacatgtagtaggcgtggtagccctacttggaacagttttc
tccgttgaacttagcaggattttagccgagtacttgggtgaagatcaaatgcttgcggtt
gtgtgcaaattctatcattcagcagctgctcttgagcaatatgggcataacggtgaagtt
gattctaagttcggtcttcatgcagaagctaccgcacttggtaaatctttaagtggccga
tttcttgttgtctgcctcgaggatatcaggccttatccgggaggggttgatttcaatgac
cctcaaaggaagcttgtattaccaatccctagcttatcatttggacaccagcctccgggt
tttatcggctatgcagttaacatgattaacctggataattccgactacagaactgattcc
ggccacggcttgagggagacgctgttctacagactttttggcaaggttcaagtatatgat
acaagggaacatttggaaaaggctcgtaattgcatagaacatggtgctgtgtctctagat
ggagggattatgaggaagaatggacttatatctcttggattcaggagcccggaaatatat
tttcgggtcgagaataggtacgtatctccgcaaagcaagaacgtcatggatcaaatcaag
gaaaaacaaactgaactaacaaccaccttgcaaaaaatagataaatcaaatgaaaagctt
aagagagatcttcttaggctcgacaagaaaaaaaccaagcttcgggtgtacatggataat
accgattatgcgatcaacaatatcgtaactatgagcccactgcaatactcccaagagctt
ggaactccttcccaatcgaccccgaggcatatgagcccactgcaatacacccaagagctt
ggaactcctccccaatcgaccccgaggcatatgagcccactgcaatacacccaagagctc
ggaactccctcccaatcgactccgagatga
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integrated database retrieval system
