KEGG   Herbaspirillum seropedicae Z67: ACP92_08060
Entry
ACP92_08060       CDS       T04519                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hsz  Herbaspirillum seropedicae Z67
Pathway
hsz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hsz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    ACP92_08060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsz03400]
    ACP92_08060
Enzymes [BR:hsz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     ACP92_08060
DNA repair and recombination proteins [BR:hsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     ACP92_08060
 Prokaryotic type
     ACP92_08060
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 HHH_8 Ogg-HhH
Other DBs
NCBI-ProteinID: AKN65189
LinkDB
Position
complement(1844785..1845435)
AA seq 216 aa
MNPTKRREIFERLRQANPTPTTELEYTTPFELLIAVLLSAQATDVSVNKATRKLYPVANT
PEAIYRMGVDQLMPYIQTIGLYRTKAKNVIETCRILIEEHGGQVPESREALEALPGVGRK
TANVVLNTAFGHPTIAVDTHIFRVSNRTGLAPGKDVDEVERKLIKFVAPEFRQDAHHWLI
LHGRYTCIARKPQCWNCIIADLCEFKQKTPLPSKGV
NT seq 651 nt   +upstreamnt  +downstreamnt
atgaatcccaccaaacgccgcgagatcttcgagcgcctgcgccaggccaatcccaccccc
accaccgagctggaatacaccacgcccttcgagctgctcattgccgtgctgctctcggcg
caggccaccgatgtctcggtcaacaaggccacgcgcaagctctacccggtggccaacacg
cccgaggcgatctaccgcatgggcgtggaccagctcatgccctacatccagaccattggc
ctgtaccgcaccaaggccaagaatgtcatcgagacctgccgcatcctgatcgaagaacac
ggcggccaagtgccggagtcgcgcgaggcgctcgaagcgctgccgggcgtggggcgcaag
acggccaatgtggtcttgaataccgcctttggccatcccaccatcgcggtcgatacgcat
atcttccgcgtgtccaaccgcacggggctggcgccgggcaaggatgtggacgaggtcgag
cgcaagctcatcaagttcgtcgcgcccgaattccgccaggatgcccatcactggctgatc
ctgcatggccgctatacctgcatcgcgcgcaagccgcaatgctggaactgcatcattgcc
gacctctgcgaattcaagcagaagaccccgctgccgagcaagggcgtctga

DBGET integrated database retrieval system