Halichoeres trimaculatus (threespot wrasse): 141785722
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Entry
141785722 CDS
T11192
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
141785722 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
htc03400
]
141785722 (lig4)
Enzymes [BR:
htc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
141785722 (lig4)
DNA repair and recombination proteins [BR:
htc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
141785722 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
DNA_ligase_A_C
BRCT
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
141785722
NCBI-ProteinID:
XP_074520264
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MEGTATTSDAAQPSVAAQVPFIHLCNTLEKIQKSKTRPEKNKNLGDFIDSWRKFHAALHK
DNPKTTDSFYPAMRLIVPPFERERMAYGIKESMLAKLYIDVLGLPKNGPEANKLLNYRAP
TTSQGEAGDFAGIAHFVLKKRCSSQGNLTIKEVNDFLDSVAINNATKKKDLVKKSLLHLI
TQSSALEQKWLIRMILKDMKLGISKETVLQIFHPDANDLYNVNTDLNKVCQQLHNPSVSL
SDVSIGLFSAFKPMLAAVANIRNVEKQMGNSPFYIETKLDGERIQLHKDGDVYKYFSRNA
FEYTQQFGGSPLEGSLTPYIHNVFKSNIVNCILDGEMMAYNPTAETFMQKGSKFDIKRLM
DDSELQTCFCVFDVLLVNNQKLGKETLKKRYEVLQTVFTPVKGRIHLVPKADARTMQEVV
NALNDAIDNREEGIMVKDPLSIYKPDKRGEGWLKIKPEYMSGLMDELDLLIVGGYWGKGR
RGGMMSHFLCAVAEAPKPGEKPSVFHSFCRIGSGYTMKELYDLGLKLAKNWKVYRKNDPP
ASILCGTEKPEVYIEPCNSVIIQVKAAEIVGSDMYKTNCTLRFPRIEKIRDDKEWHQCMT
LAELDEFRGKASGKLASRHLRIDDEEPQKKKRKAPAKPKKVVGIVDHFKQQDLSGVKKET
DMFEDVEFCVLNGTEDHPKAELEKGVARCGGIVVQNPGRDTYCVIAGVENMRVKNLISSA
QHDVVWAAWLLECLDQKDVVPWQPRHMIHMSPSTREHFAKEYDSFGDSYFVDTDEQQLRE
VFTRMSDTESTGMDMGQVEQRYGWEDLPTSLFRPFVVYMDCYADVSDPAAALPATCLDIR
ALEFRYHGGKVVQKLEEGVSHVIISEETRLLELRTLRRCFRKKFKIVKDSWVTDSIKAGF
LMNDTDYSV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaactgcaacgacaagtgatgcagcacagccctctgttgctgctcaggttcct
ttcatccacctttgcaacactctggagaaaatccagaagtctaaaactcgtccagagaaa
aacaagaacctaggagatttcatcgactcatggcggaagtttcatgctgccctccacaaa
gacaaccccaagacaacggactctttctaccccgccatgcgtctcatcgtccctcctttt
gaacgagagcgtatggcctatggcatcaaagagagcatgctggctaaactctacattgat
gttctaggccttcccaaaaacggccctgaagcgaataaacttctgaactaccgggcaccg
actacttcccaaggagaagcaggagactttgcgggcatagcgcattttgtactcaagaag
cggtgctccagccaaggaaacctcactatcaaagaagtcaacgacttcctcgactcggtg
gccatcaacaatgctacgaagaagaaggaccttgttaagaagagtttgctgcaccttatc
acccagagctcagctcttgagcaaaagtggctcatcaggatgatcctgaaggacatgaag
cttgggattagcaaagagactgttcttcagatcttccaccctgatgccaatgacctctac
aatgtgaatacagacttgaacaaggtgtgccagcagctccacaacccctctgtgtcattg
agtgacgtctcaattggactcttctctgctttcaagccgatgttggcagcagtggcaaac
attcgaaatgtcgagaaacagatgggaaacagcccattttacatcgaaaccaagctggat
ggggagcgcattcagctgcacaaagacggagacgtttacaagtacttcagccgaaatgcc
tttgaatacacgcagcagtttggaggatccccactggagggctcactgacaccttacatc
cacaatgtttttaaaagcaacatagtgaactgtatcctggatggagagatgatggcgtac
aacccaaccgctgagacctttatgcagaaagggagcaaattcgacatcaagagactcatg
gatgactctgagttacagacatgtttttgcgtttttgacgttttgttagtgaacaaccag
aagcttggaaaggaaactttgaagaagcgttacgaggtcttgcagacagtcttcacgcca
gttaaaggaagaatacacctggtgccaaaggctgatgccagaaccatgcaggaagtggtg
aacgcactcaatgatgcaattgacaacagagaagaaggaatcatggtgaaggatcctttg
tccatctacaaacctgacaagcgtggggaaggatggttgaaaataaagccagagtacatg
tctggcttgatggatgagctggatcttctcatcgtcggtggctactgggggaaaggacgg
cgaggcggtatgatgtcacacttcctgtgtgcggttgctgaagctccaaagcctggagag
aaaccctcagttttccacagtttctgccgcattggttctggctacaccatgaaggagctg
tacgacctcggtttgaagctcgcgaagaactggaaagtctatcgtaagaacgacccgcct
gcgtccatcctgtgtggaacggagaaaccagaagtttacatcgaaccatgcaactcagtc
atcatccaggtgaaggcggcagaaatcgtcggaagcgacatgtataagacgaattgcact
ttgcgtttcccgaggattgagaagatccgtgacgacaaggagtggcatcagtgcatgact
ctggcggagctggatgagttccgcggaaaggcttctgggaaacttgcctcgcgacacctt
cgcattgatgacgaggaaccgcaaaagaagaaacgcaaggcgcctgccaaaccgaagaaa
gtggtcgggattgtcgaccactttaagcagcaggacctctccggggtaaagaaagaaacg
gatatgtttgaggatgtggagttctgtgttctgaacggcactgaagatcaccccaaagct
gagctggagaagggcgtggccaggtgtggaggtatagtggtccaaaacccaggccgggac
acctactgtgtgatcgccggggtggaaaacatgcgcgtgaagaacctgatttcatccgcc
cagcatgacgtggtgtgggccgcctggctgctggagtgtctcgaccagaaggatgtggtc
ccatggcagccacgtcacatgatccacatgtcgccctccacgagggagcacttcgctaaa
gagtatgacagcttcggcgacagctacttcgtggatacagatgagcagcagctgcgggag
gtgttcacccggatgagcgacacagaatcaacagggatggacatgggccaggtggagcag
cggtacgggtgggaggaccttccaaccagcttgttcagaccctttgtggtttacatggac
tgctacgctgacgtcagtgaccctgcagcagctttacctgccacctgtttggacatcagg
gcactggagttccgctaccacggagggaaggtggtgcagaagttggaggaaggagtgtct
catgtcattataagtgaagaaaccagacttttagagctccggactctgaggcgctgcttt
aggaagaagttcaagatcgtgaaagactcatgggtgacggattcaatcaaagcgggcttt
cttatgaacgacactgactactcagtttga
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