Halichoeres trimaculatus (threespot wrasse): 141793321
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Entry
141793321 CDS
T11192
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141793321 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htc03000
]
141793321 (kdm2ab)
04121 Ubiquitin system [BR:
htc04121
]
141793321 (kdm2ab)
03036 Chromosome and associated proteins [BR:
htc03036
]
141793321 (kdm2ab)
Enzymes [BR:
htc01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
141793321 (kdm2ab)
Transcription factors [BR:
htc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
141793321 (kdm2ab)
Ubiquitin system [BR:
htc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141793321 (kdm2ab)
Chromosome and associated proteins [BR:
htc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
141793321 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
141793321 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
LRR_6
PHD
LRR_8
C1_1
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
141793321
NCBI-ProteinID:
XP_074529998
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MEDSHTRYSKRLRTGTRRRYQDDGISDDEIEGKRMFDLDEKLQCHRFNSDLIKHMEGKDF
TFEYIQREGLRDPIVFDTADGLGLQMPDPDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLE
MYENWVLSGKQGDIFLGDKCHDCQRIELKQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNISHLTPEFKKYSLGIG
LTQADLETMDHNGNGTSNGVDSDSENGGTEMKEDDAYEEKTVRDLKSQHVLTAFELEGLC
NLLGKLEELPAHKKCVPAGIRNAAALLEDMRVVLRNHTIDNPKLSYTGEPIVKWPERPSW
YQPPPPPPPVLYRPRLAPTLHKPLGQRPNKRSSISALRRRRVRCKRCAACRRKECGSCQY
CHDMRKFGGPGRMKKSCVMRQCLAPALPNTARCAICGEGESEESDPSTHSLMECSVCSQI
THQQCLKEPGEGKINKDLPSCWECPKCYQGKETESESSSDEESGESEGFTSLPPSKLAYR
EGIGVGEGVRRGRRSRPASRPTAPPPSQKLLLQHQQNRKRASALELRLKKRIKLERSKLL
TRQAALDRSPRLLGSRMLSRLRSPTSRFSQGRGRGSTWASSSSHHSSPRGTGSIQQQQPS
SLDLVLESKGEPRRGRGRGVRLRGGGAGRGMRIGRSHEEMQEESEDSSSSSTNSSSSSDD
DEEEERGQKSVKGLDKENQPQSRQGGCAAKERGGEGSDVANQNGAEEDEEEEMEQDTQTG
GKDGSNLKVTLQRPTRAKRDPSSIVPKLEAISPQTASSTIHNQTRTLARPPIRNHGPCPD
QHSNKHTAPHTRSRHTDTHRSHHARLDASKRAQLSRPAKLSNGASCSSSSELPHHRIPLS
ALQEGGGEADRDGGGGGPGCEREVWVSVFRYLSRADLCVCMAVCKNWYKWCLDKRLWSRI
DLSIKRTVTPQALTGIIKRQPVTLDLSWTNISRKQLNWLVGRLPGLKDLMLAGCSWSSIS
ALCSSGCPLLRSLDLRYADGIKDTQIRDLVTPPGCDNRSQLRTMQCLRLAGLDISDSTVR
LVIRHMPHLTKLDLSHCNSLTDHSINLLTAVGSSTRNTLAELNLGGCSKLTDTCLKYLRR
LSCISLLDLRGCKGVSRKACEAFISELSVNTLYCLSDEKLIQRIS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggaggattctcacacacggtacagcaaacgcctgcgtacaggcacacggcggcgctac
caggacgatggaatatcagatgatgaaatcgaggggaaacgaatgttcgatctagatgaa
aagttgcagtgccacagatttaactctgacttgatcaaacacatggagggtaaagatttc
acatttgaatacatccagagagaagggctcagggaccccattgtctttgacacagctgat
ggccttggcctacaaatgccggaccctgacttcagtgttagtgatgtcaagctgtttgtt
ggtagtcgacgcattgtggatgtgatggacgtcaacacccagaagggaattgagatgtca
atggctcagtggcgacgctactatgagacacctccgtcggaaagagaaaagctctacaat
gttataagcctggagttcagccacactaggctggagaatctggtcaaacgacctgcttcg
gtggacctgattgactgggtggacaacatgtggcctcgtcatctcaaagaaagacagagg
gactccacaaatgccattatagacatgcattatcctaaagtacagaagtactgtctgatg
agcgtgcagggctgcttcacagattttcacattgacttcgggggcacctcagtctggtac
cacatcctgcgaggaggaaaggtgttctggttgattccacccacgccacagaacctggag
atgtatgagaactgggtattatctggaaaacagggagacatctttttgggtgacaagtgt
catgactgtcagaggatagagctgaagcagggaaacaccttcataatcccatcagggtgg
attcatgctgtgtacaccccagaggacactttagtatttgggggtaatttcctccatagc
tttaacatccccatgcagctcaacatctacagcattgaagaccgaacacgggtgccagca
aagtttcgctacccattctactatgagatgtgttggtacgtcctagagagatacctctac
tgtctgaccaacatatcccatctcactcctgagtttaaaaagtactcccttggcataggg
ctgacccaagccgaccttgaaaccatggatcacaatggaaatggtacttcgaatggggtt
gacagtgacagtgaaaacggagggacagagatgaaagaagacgatgcctatgaagaaaag
acagttcgagatctcaaatctcagcatgtgctcactgcctttgagcttgagggcctgtgt
aaccttttggggaaattagaggagctgcctgcccacaaaaagtgtgtccctgcaggcatc
aggaacgctgcagctctgctcgaagacatgagggttgttttaaggaatcacaccattgat
aaccctaaactgtcctacacaggagagcctattgtcaaatggccagaaaggccgtcatgg
taccagccgccccctccccctccccctgtactctaccgccctcgcttggcccccaccctt
cacaaacctttgggacagaggcccaacaaacgctcctccatctctgccctgaggcgtagg
cgggtaagatgcaagcgctgtgctgcctgccgcaggaaggagtgtggctcatgccagtac
tgccacgacatgaggaagtttggtgggcctggacgcatgaagaagagctgtgtcatgaga
cagtgtttggcgcctgccttgccaaacactgcgcgctgtgccatatgcggagaaggagaa
tcagaggagtcagatccgagcacccactcactcatggagtgctctgtctgttcacagatc
acacatcagcaatgtcttaaggaacctggtgaggggaagatcaacaaggatttgcccagc
tgctgggaatgtcccaaatgttaccaaggcaaagagacagaatcagagtcttccagtgac
gaggagagtggagaatccgaaggctttacctctttgccaccatccaaacttgcataccgg
gagggtattggtgtaggagaaggggtcagacgagggagacgtagtagaccagcttccaga
cccacagcaccgccgccttctcagaaactgctcttgcagcatcaacagaaccgcaaaaga
gcaagtgcacttgagctccgactcaagaaaaggataaaactggagcgaagcaaactttta
acgagacaagcagctttagatcgttctcccagactgctgggctccagaatgctgtcgcgg
cttcgttctccaaccagcagattttctcagggcagaggccggggcagcacctgggcgagt
agctcctctcaccacagctctccaagagggactgggtccatccagcaacagcagccgtcc
tccctggatctggttcttgagtccaaaggagagccccgcagagggaggggaagaggggtg
agactgcgggggggaggagcaggacgagggatgagaattgggagaagccatgaagagatg
caggaagagagtgaggacagcagcagcagcagcaccaacagcagcagcagcagtgatgat
gatgaggaagaggagagggggcagaaaagtgtgaagggtttggataaagagaaccaacca
cagtcgaggcaaggaggatgtgcagccaaagaaagagggggggaagggagcgatgtggct
aaccaaaatggtgcagaagaagatgaggaggaagagatggagcaggacactcaaacaggg
ggcaaagatggctcaaaccttaaagtgacacttcagaggccaaccagggcaaagcgggat
ccatcatccattgtccctaaattagaggccatctcccctcagactgcttcttccacaata
cacaaccagaccaggacgcttgccagacctcccatcagaaatcatgggccctgccctgat
caacactccaacaagcacacagccccacacactcgcagtaggcacacagacactcatagg
tcccaccatgcgaggctggacgcctcaaaaagggcccagctgagcaggccagctaaactg
agcaacggagcctcctgctcttcatcctctgagcttcctcatcatcgtatccctctgtca
gccttgcaggaaggagggggtgaggcagacagggatggtggtgggggcggaccaggctgt
gagagggaagtgtgggtgtctgtcttccggtatttaagtcgggcagacctctgcgtctgc
atggctgtctgcaagaactggtacaaatggtgtttagacaaaaggctttggtcacgaatt
gacctgagcatcaaacgcaccgttactcctcaggccctaacaggcatcatcaagagacag
ccggtcacactcgatctctcttggaccaacatttctagaaagcagctgaactggctggtt
ggccgtctgcctggtctgaaagatttgatgctggcaggttgttcctggtcatctatttca
gctctctgttcctctggttgccctctcctccgctctctggatctgcgatatgcagatggg
atcaaagacactcagatcagggatctagtaacccctccaggctgtgacaatcgtagtcag
ctgcggaccatgcagtgcttacgactagcaggcttggacataagtgactctaccgtgcgc
ctggtgatccgccacatgccccatttaaccaaactggacctctctcactgcaacagcctc
acagaccactccattaacctgctgactgccgtaggctcttccactcgaaacactctcgca
gaactcaacctgggaggttgcagtaaactgacagacacgtgtcttaagtatctcagacgt
ctctcttgcatctcactgctcgacctgcgaggctgcaaaggtgtctctcgcaaggcctgt
gaggctttcatctctgagctgtctgtcaacaccctgtactgcctgtctgatgaaaaactg
attcagaggatatcctaa
DBGET
integrated database retrieval system
