KEGG   Halichoeres trimaculatus (threespot wrasse): 141795144
Entry
141795144         CDS       T11192                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
htc  Halichoeres trimaculatus (threespot wrasse)
Pathway
htc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:htc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141795144 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:htc03041]
    141795144 (smndc1)
Spliceosome [BR:htc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    141795144 (smndc1)
 Complex B
    141795144 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    141795144 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR SH3_Hsr9 T3SS_needle_F DUF2730 LST2_mid
Other DBs
NCBI-GeneID: 141795144
NCBI-ProteinID: XP_074532027
LinkDB
Position
Unknown
AA seq 238 aa
MSDDLVKQLSNYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLTNQPTESTSS
TNGTEPVPVKHGWKVGDRCMAAWSHDGQVYEAEIEEIDRENGTAAVTFAEYGNAEVIPLQ
NLKAVEEGRRSEEDGGGKPKSRKEQIAEQREYKKKKAQKKVLRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggacgacttggtcaaacagttgagcaactacaaagcccaactacagcaagttgaa
gttgctttgtctactgacccggacaatgaagatctactcaaactccaaaaagatttacag
gaagttatagacttaacaaaagatctcctgaccaatcaacccactgaaagtacttccagc
actaatggcacagagcccgttcctgtaaagcatggctggaaagtgggagacaggtgtatg
gcagcctggagtcatgatggacaggtgtatgaggccgagattgaagagatagaccgggag
aatggcaccgcagctgttaccttcgctgaatatgggaatgctgaagtgattcctcttcag
aatctcaaagcagtggaagaggggaggcgttctgaggaggatgggggcggcaagccgaaa
tcaaggaaagagcagatagcagagcagagagagtataagaagaagaaagcccaaaagaag
gttctgaggatgaaggagttggagcaagaaagagaggagcagaagtcaaagtggcaacag
ttcaacaacaaagcctactcaaagaacaagaaaggacaggtaaagaggagcatttttgca
tctccggaaagtgtaaacggaaaggtgggagtaggaacatgtggcattgcagacaagcca
atgacccagtaccacgacacgtcaaaatacaatgtcagacatttaatgccgcagtga

DBGET integrated database retrieval system