Halichoeres trimaculatus (threespot wrasse): 141801782
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Entry
141801782 CDS
T11192
Symbol
thbs1b
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04115
p53 signaling pathway
htc04145
Phagosome
htc04148
Efferocytosis
htc04350
TGF-beta signaling pathway
htc04510
Focal adhesion
htc04512
ECM-receptor interaction
htc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141801782 (thbs1b)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141801782 (thbs1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
141801782 (thbs1b)
04148 Efferocytosis
141801782 (thbs1b)
09143 Cell growth and death
04115 p53 signaling pathway
141801782 (thbs1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
141801782 (thbs1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141801782 (thbs1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
htc04131
]
141801782 (thbs1b)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
htc00536
]
141801782 (thbs1b)
Membrane trafficking [BR:
htc04131
]
Endocytosis
Phagocytosis
Opsonins
141801782 (thbs1b)
Glycosaminoglycan binding proteins [BR:
htc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141801782 (thbs1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
cEGF
TSP1_ADAMTS
Laminin_G_3
EGF
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
141801782
NCBI-ProteinID:
XP_074541146
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MLEKLFDFYLGERKLFKFSRIISGFLHILDLFLCSAVLEKQVAGLTMKLTGIFLLLMLWS
CESARVAESRDDNSVYDLFELVQVPKKNHGVTQVKGDDPYSPAYKILNPDLIPPVPESAF
RDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKLDGSGPVFEIVSNGKANTLDIVFSTE
NKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYAGCEEVNIAELDAPIQSILTPETPASA
RLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNTITTDTMILENLNGSSAIRTE
YTGHKTKDLQMVCGFSCEDLISMFKELKSLGVVVKDLAVKLRQLTDENKLINSRIGIHSG
VCIHNGIVHKNRDEWTIDDCTKCTCQNSATVCRKISCPLVSCSNATVPDGECCPTCGLPS
DSAEGSWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTRDCYLQECDKRFKQD
GNWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCVGEGRQTEKCQKSPCSINGNW
GPWSPWDSCSLTCGGGNQMRKRLCNNPAPKYGGKECIGDAKENQLCNKEACPVDGCLSNP
CFAGAKCTSFPDGSWKCGKCPAGYTGNGIKCKDIDECKEVPDACFEFNGVHRCENTDPGY
NCLPCPPRYSGSQPFGRGVEQATAKKQVCTPRNPCLDGSHDCNKNARCNYLGHFADPMYR
CECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNLPNSGQEDYDKDGIG
DACDSDDDNDGIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCPYNSNPDQTDTDNNGEGD
ACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHNPDQVDSDDDRVGDK
CDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDNDGIPDDKDNCRLAFN
PDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQMVPLDPKGTSQIDP
NWVVRHQGKELVQTVNCDPGIAVGYHEFNSVDFSGTFFINTERDDDYAGFVFGYQSSSRF
YVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALWHTGNTAGQVRTLWH
DPKNVGWKDFTAYRWHLIHRPRTGLIRVVMYEGKKIMADSGSIYDKTYAGGRLGLFVFSQ
EMVYFSDLKYECRDV
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagaagttgtttgacttttacctgggggaaagaaaactttttaaattctcgagg
attatttctggatttctacacattttggatttattcctttgctccgctgttttggagaag
caggtagcaggtctcaccatgaagctgacagggatatttttgctcctgatgctctggagc
tgcgagagtgcaagagttgcagagtctcgagacgacaatagcgtgtatgacttgtttgag
ctcgtccaagtccccaagaagaaccacggcgtgacccaagtgaaaggagacgacccgtac
agcccagcctataagatcctcaacccggacctgatcccccctgtccccgagagtgccttt
agggacctgatcgattccatccacgccgagaggggattccttctcctgctcaactttaag
cagttcaagcgtaccaggggaagcctcctcactgtggagaagctggacggctccggaccc
gtgtttgagatcgtctccaacggcaaagcaaacaccttggacatagttttctccaccgag
aataagcagcaggtggtttccattgaggatgtggatctggctaccgggcactggaagaat
atcacgctgttcgtgcaggaggaccgcgcgcagctgtacgcgggatgcgaggaggtgaac
atcgccgagctggatgcgcccattcagagcatcctgacgccggagacgcctgccagcgca
cgcctgaggattgggaagggagcagtgaaagacagattcatgggggtcctccaaaacgtg
cggtttgtgtttggaaccacactggatgccatcctgcgcaacaaaggatgccaaaacacc
atcaccactgacaccatgatcctggagaacctgaacggctcctcagcgatcagaactgag
tacaccgggcacaagactaaagaccttcagatggtctgtggcttctcctgtgaggaccta
atcagcatgtttaaggagctgaagagcctcggtgtcgtggtcaaggacctggctgtcaag
ctccgccagctgacggacgagaacaagctgattaacagccgcatcggcattcacagcggt
gtctgcatccacaacggcatcgtgcacaagaacagagacgagtggaccatcgatgactgc
accaagtgcacttgtcagaactctgctacagtgtgccgcaagatttcctgcccactggtg
tcctgctccaacgccacagttcctgatggagagtgctgcccaacctgtggactaccgagc
gactccgcagagggcagctggtcgctttggtctgaatggacccattgttccgtgtcatgt
gggcggggcatccagcagcgtgggcgctcttgcgaccgtatcaataacaactgtgagggt
acctctgtgcagacccgcgactgctacctccaggagtgtgacaagcgcttcaagcaggat
ggcaactggagccactggtcaccctggtcatcatgctctgtcacctgtggtgctggtgtc
atcacccgtatccgcctttgcaactcccccacccctcaacttggaggcaaggactgtgtg
ggagagggtcgccaaactgagaagtgtcagaagtctccatgctcgatcaatggtaactgg
ggaccctggtcaccctgggatagttgcagtcttacctgtggaggaggtaaccagatgcgt
aaacgcctgtgcaacaaccctgcaccaaaatacggtggcaaagagtgtatcggtgatgcc
aaggagaaccaactgtgcaacaaggaagcctgcccagttgatggatgcctttcaaaccct
tgctttgctggagccaagtgcaccagtttccctgacggttcttggaagtgtggaaagtgc
ccagctggctacaccggcaatggtatcaagtgtaaagatattgatgagtgcaaggaggtt
cctgatgcttgcttcgagtttaatggtgttcaccgctgtgagaacacagatcctggctac
aactgtctgccctgtcctcctcgctactcaggatcccagccatttggaaggggtgtggag
caagctactgcaaagaaacaggtgtgcacaccccgtaatccctgcctggatggaagccac
gactgcaacaaaaacgcccgctgtaactatctggggcacttcgcagatccaatgtaccgc
tgtgagtgcaagccaggttacgctggcaatggacatatctgtggagaggacactgatctg
gatgggtggcccaatgctgacttggtttgtgttgaaaatgctacctaccactgcaagaag
gacaactgtcccaaccttcccaactctgggcaggaagattatgataaggatggcatagga
gatgcttgtgacagtgatgatgacaacgatggcattcctgatgacagggacaactgtcca
ttcgtgtacaaccccaggcagtatgactatgaccgtgatgatgtgggtgaccgctgtgac
aactgcccctacaacagtaacccagaccagacggacactgataacaatggagagggagac
gcctgcgctgtggacatcgacggtgatggcattttgaatgagaaggacaactgcccgtat
gtgtataatgtcgaccagagagacacagatctggatggagtgggagacatgtgtgacaac
tgccccctggaacataatcctgatcaggtagattcagatgacgaccgtgtgggagacaag
tgtgacagcaaccaggacatcgatgaggatggacaccagaacaacctggacaactgccca
tacatcccgaatgctaaccaagccgaccatgacaaggatgggaagggagatgcttgtgac
catgatgacgacaatgacggcatcccagatgacaaggacaactgcaggctggctttcaac
ccagaccaactggactctgatggtgatggtcgtggagatgcttgcaaagatgactttgat
caagacaacgttcctgacatctacgacgtgtgcccagagaactttgacatcagtgagaca
gacttccgcaagtttcaaatggttcctctcgaccccaaaggcacttctcagattgacccc
aactgggttgtcaggcaccagggcaaagagcttgtgcagactgtaaactgtgatcctggc
attgctgttggttaccacgagttcaactctgtggacttcagtggaacttttttcatcaac
acagagcgggatgatgattatgctggctttgtttttggctaccagtccagctccaggttc
tatgttgtgatgtggaaacagattacacagacatattggtctaataaacccacgaaggct
caaggttactctggcctgtccatcaaagtggtcaactccaccactggcccaggagagcac
ctgaggaatgccctctggcacacagggaacactgcaggacaggtccgcactctttggcat
gacccaaagaatgttggatggaaagacttcactgcctacagatggcacttgatccacaga
cccagaacaggacttatcagagttgtgatgtatgaaggcaagaagatcatggcagattct
ggaagcatctacgacaagacatatgcaggtggcaggctaggtcttttcgtcttctcacaa
gagatggtatacttctcagacctcaagtatgaatgcagagatgtctaa
DBGET
integrated database retrieval system
