Halichoeres trimaculatus (threespot wrasse): 141810848
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Entry
141810848 CDS
T11192
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
htc Halichoeres trimaculatus (threespot wrasse)
Pathway
htc04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
htc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
141810848 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
htc03000
]
141810848 (irf5)
Transcription factors [BR:
htc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
141810848 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
141810848
NCBI-ProteinID:
XP_074554785
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSIQPRRIRLKPWLLAQVNSGRYPGLQWLSPDHRLFQIPWKHATRHTPTSDEENTIFKAW
ALETGKYQDGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCEQPGST
DGGDEDEEEMPNLMELSINPGTTHPPSYDFMAASEASQFRLAPTAFGTPPVLDMTPELLM
TSDHSMTSQPTLTSDLPHRVVAQGSFVCPPSLQDLNTLPPSAAAAPSGPASMETGSIGGV
QTQGDPQNQSYKYDLLSSIPLTDLDLKFQYRGRTAGSLTVSNPQGCRLYFGHLEPTPEQV
ELFGPVTLQQVRFPAASEIQNQKQRFYTEALLDVMDRGLILEIWEQDIYAIRLCQCKVFW
SGPGMPDQGPPNPMEREKKIKVFSLNGFLQELIQFQKGEAQHPPPFEINFCFGEDWPDKK
PREKKLIMVQVVPVVARILTEMFSGELSWSTDSIRLQISNPDVKDQTVEQFKELQRLLQS
QQIQGPWTPAGH
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccagccccgcaggatccgtctgaagccctggttgctggctcaggtgaacagc
ggcaggtaccctggtctacagtggctgagtccagaccaccggctcttccagatcccgtgg
aaacatgctacacgacatacgcccacatcagacgaggagaacacaatctttaaggcgtgg
gctctggagacaggtaagtatcaggatggcgtggatgaacccgatcccgccaagtggaaa
gccaaccttcgctgcgctctgaacaaaagccgtgagtttcagctgaagtacgacgggact
aaagaaacacctgtacaaccgtacaaaatctacgaggtctgtgagcagccagggagcaca
gatggaggtgatgaggatgaagaggagatgccaaacctgatggagctctcaatcaaccca
gggacaactcatcctccctcctacgactttatggcggcatcagaggcgtctcagttcaga
ttggcccccacagcgtttggaactccacctgtcctcgacatgacccctgaactcctaatg
acctcagaccactccatgacctcgcaaccaaccttgacctctgaccttccacatcgagtg
gtggctcaggggtcttttgtctgtcctccaagtcttcaggacctgaacactctgcccccc
tcggctgctgctgccccctctgggccggcctctatggagaccggcagcattggaggagtc
cagactcagggagaccctcagaaccagtcctacaagtacgacctgctgagcagcatccca
cttacagatctggatctaaagttccagtaccggggacgtacggcaggctctctgaccgtc
agtaaccctcagggctgcaggctctactttggacacctggagccaaccccggagcaagtg
gaactgtttggacctgttactctgcagcaggtccggtttccagcagcatctgagatccag
aaccagaagcagcgcttctacacggaggccctactggatgtcatggatcggggtctgatc
ctggagatctgggagcaggacatctacgctatccgcctctgtcagtgtaaggtgttctgg
tctggacctggcatgccagatcagggtccaccaaaccccatggagagggaaaagaagatc
aaggtgttcagtctcaacgggtttctgcaagagttgatccagttccagaagggggaggct
caacacccacctccctttgagatcaacttctgttttggggaggactggccagacaagaag
cccagagagaagaagctcatcatggtccaggtggttcctgttgtggctcgaatcctgaca
gagatgttctctggggaactcagctggtccacggacagcatccgcctccagatctcaaac
cctgacgtaaaggaccagacggttgagcagttcaaagagctccagaggctcctgcagagc
cagcagatccagggaccctggacccctgctggccactga
DBGET
integrated database retrieval system
