KEGG   Hydrogenobacter thermophilus: Hydth_0035
Entry
Hydth_0035        CDS       T02106                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hte  Hydrogenobacter thermophilus
Pathway
hte03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hte00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Hydth_0035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hte03400]
    Hydth_0035
Enzymes [BR:hte01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Hydth_0035
DNA repair and recombination proteins [BR:hte03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Hydth_0035
 Prokaryotic type
     Hydth_0035
SSDB
Motif
Pfam: HhH-GPD HHH Ogg-HhH EndIII_4Fe-2S HHH_5 Fis1_TPR_N
Other DBs
NCBI-ProteinID: ADO44445
UniProt: D3DF99
LinkDB
Position
38965..39615
AA seq 216 aa
MRKEDVEKVIDILRREFPRWNAPVVSLIAQKTGDPFRVLVCALISTRTKDETTAMVCKRL
FERIKNVDDLYNIDEEELSRLLYPVGFYKNKAKFLKSIAEEIKKNYSSQVPNKLEDLLKL
KGVGRKVANLVLSEGYGIPAICVDTHVHRITNRWCLIKSKDPEETERKLTEILPEKYWIE
FNKLLVAFGQTLCKPVKPLCGVCPIREYCEYEFKTL
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagaaaagaggatgttgaaaaagtcatagacattttaaggcgagagtttcccaggtgg
aatgcacctgtggttagtctgatagcacaaaagaccggagaccccttcagagtgcttgtc
tgtgctctaatatcaactagaacaaaagacgaaactacagcaatggtttgcaagaggctg
tttgaaagaataaaaaatgtggatgacctttataacatagacgaggaagagctctcaaga
cttctctatcctgtaggtttttacaaaaacaaagctaagttcctgaaaagcatagcggag
gaaataaagaagaactatagctcacaagtccctaataagttggaggacctgctaaaacta
aagggtgttggaagaaaggtggcaaatctggtgctttctgagggctacggcatacctgcc
atatgtgtagatacgcatgttcacaggatcaccaacaggtggtgccttataaagagtaag
gatcccgaagagacagagaggaagcttacagagatcttacctgaaaaatattggatagag
tttaacaaacttctggtggcgtttggtcaaacactgtgtaagcctgtaaaacccttgtgt
ggtgtatgtcccataagagaatactgcgagtatgagtttaagactttgtga

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