Hymenobacter taeanensis: HMJ29_12230
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Entry
HMJ29_12230 CDS
T08050
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hts
Hymenobacter taeanensis
Pathway
hts01501
beta-Lactam resistance
hts01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hts00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HMJ29_12230
01503 Cationic antimicrobial peptide (CAMP) resistance
HMJ29_12230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hts03036
]
HMJ29_12230
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hts02000
]
HMJ29_12230
01504 Antimicrobial resistance genes [BR:
hts01504
]
HMJ29_12230
Chromosome and associated proteins [BR:
hts03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HMJ29_12230
Transporters [BR:
hts02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HMJ29_12230
Antimicrobial resistance genes [BR:
hts01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HMJ29_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
BSH_CusB
Beta-barrel_RND
HH_MFP_RND
BSH_LcnD
Biotin_lipoyl
HH_EMRA
HH_AAEA_pHBA
RND-MFP_C
CzcB_C
HH_AprE
BSH_YhbJ
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
QJX47667
UniProt:
A0A6M6BHL3
LinkDB
All DBs
Position
complement(2878448..2879623)
Genome browser
AA seq
391 aa
AA seq
DB search
MQTQEREPEVAIPETDTPRSGGAGRRILWLIISLAVVAALVFIKMKYFPAQSAEKGGGKG
AAGGKGGPGAAGAKGSKGGGQKLPVQVYVVKATNLSDEVAATGSILAEESVVIKSEISGK
ITSLNIREGQPVRKGQLLFTINADEIQSNLRKQEYNIKLFRDQERRQRTLLDKEYISAQE
YEQANNQLLTAQADLQTLRASLAKAYVRAPFDGVLGLTTATVGTYVSPGAEITTLSKVKP
VKINFTVPGRFASMVKPSDQITITDESSNKKFQAKVYALDPQIDPVSRTQTVRARYANTN
NELRPGAFVKVNLQLGESTEALQVPTESVIPEAAGYSVYTVEDGKMVPKKVKIGVRSAKL
IQITDGLAVGDTVLRTGILQVKPGDAVKVIK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacccaagaacgcgaaccagaagtagctattcctgaaaccgacactcctcgctcc
ggtggggctggccggcggatactttggttgattatcagcctggcagtagtggctgccttg
gtattcatcaagatgaagtacttcccggctcagagtgcagaaaaaggaggtggcaaaggg
gccgcaggtggtaaaggtggccctggcgcggctggtgccaaagggagcaagggcggtggc
cagaagctaccagtacaggtgtacgtagtaaaagctaccaacctatcagatgaagtggca
gccactggctctatactggccgaagaatcggtggttattaagagtgaaatttcgggcaag
attaccagccttaatattcgggaagggcaaccggttcggaaaggacaactcctgtttacc
atcaacgccgacgagattcaatccaacctgcgcaagcaggagtataatatcaagctcttc
cgtgaccaagagcgccgtcagcgcaccctgctagacaaggagtacatcagcgcccaggag
tacgagcaggccaacaaccagctactcactgcccaggccgatttacagaccctacgcgcc
tccttggccaaagcttatgtccgcgctccgttcgatggcgtgctgggcctgactacagcc
acggtaggaacgtacgttagcccaggggctgaaatcaccacgctatctaaggtaaagccg
gttaaaatcaacttcacggtgccgggccgctttgccagcatggtgaagcctagcgaccag
attactatcaccgatgaatcttctaacaagaagtttcaggccaaggtatacgcccttgat
ccgcagattgacccggtaagccgcacccaaaccgtgcgggcccgctacgctaacacaaac
aacgagctacgacccggcgctttcgtgaaggtaaacttgcagttaggagaatcaacggag
gcgcttcaggtacccactgagtcggtgataccagaggcggcggggtacagcgtgtacacg
gtggaagacgggaaaatggtaccgaagaaggtgaagattggtgtgcggtctgcgaagcta
attcagataactgatggtttggctgtaggcgataccgttctccgtactggcattctgcag
gttaaacccggcgatgcggtaaaggtcattaaataa
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