Humibacter sp. BT305: DVJ78_14625 Help Entry DVJ78_14625       CDS       T05558                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism hum  Humibacter sp. BT305 Pathway hum03030   DNA replication hum03410   Base excision repair hum03420   Nucleotide excision repair hum03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hum00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     DVJ78_14625    03410 Base excision repair     DVJ78_14625    03420 Nucleotide excision repair     DVJ78_14625    03430 Mismatch repair     DVJ78_14625  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hum03032]     DVJ78_14625    03400 DNA repair and recombination proteins [BR:hum03400]     DVJ78_14625 Enzymes [BR:hum01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      DVJ78_14625 DNA replication proteins [BR:hum03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      DVJ78_14625 DNA repair and recombination proteins [BR:hum03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      DVJ78_14625    NER (nucleotide excision repair)     GGR (global genome repair) factors      DVJ78_14625    MMR (mismatch excision repair)     DNA ligase      DVJ78_14625   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DVJ78_14625 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD HHH_5 BRCT HHH Nlig-Ia PTCB-BRCT RNA_lig_T4_1 Motif Other DBs NCBI-ProteinID:  AXH36484 LinkDB All DBs Position complement(3091379..3093751) Genome browser AA seq 790 aa AA seqDB search MSDATTAEALPEESAPDLAAAKAEADRLTTRILELRDEYYENDASTVTDAEYDAMVRRLG ELERLHPELQSADSPTQTVGGRAETTLFAPVTHAERMLSLDNVFSEEELDEWAAKVERDA GRASVRYLSELKIDGLAINLRYEDGVLVTAATRGDGVVGEDVTQNVLQIESIPSRLQGTG HPPLVEVRGEIFFPVEAFEELNRGQIEAGERVFANPRNAASGSLRQKREGKNDRQLALMH ARLSRLRMLVHGIGAWPDPPVAAQSEVYDLLKGWGLPTSTHYRVFDTIDEVAGFIRYYGE HRAAVEHQIDGIVVKVDDLALHAELGATSRAPRWATAYKYPPEEVNTKLLDIVVSVGRTG RATPFAVMEKVEVAGSEVRQATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEVLGPVVELR DGTEREFVMPELCPECGTRLAPAKEGDIDLRCPNSRSCPAQVRGRVEHAGSRGALDIEGL GEVSAAALTQPIEPATPPLVTEAGLFSLTMSDLFPIRAVVRDNETGLEKLTESGDPKLVT PFRRRRTKKDPAFDETAVPGSPEFWGDAESMPSSAAVELLANIEAAKTKPLWRILVALSI RHVGPVAARALADWFGSLAAIRSATRDELAAVEGVGGIIADALIDWFTVDWHVEILDRWA AAGVQFATPGHPGPGASVGAGGVLEGLTVVATGSLEGYTREGAQEAIINAGGKAASSVSK KTDFVAAGPGAGSKLTKAEQLGLRILDAAEFHLLVTQGPDALAPAGDPADDAAGEAHEDA PAQEDDGPAE NT seq 2373 nt NT seq  +upstreamnt  +downstreamnt atgagcgacgcgacgacggccgaggccctccccgaggagtccgcccccgacctcgcggcg gccaaggcggaggccgaccgcctcaccacccgcatcctcgagctgcgcgacgagtactac gagaacgacgcctccaccgtcaccgacgccgagtacgacgcgatggtgcgccgcctcggc gagctcgaacggctgcaccccgagctgcagtccgccgacagccccacccagaccgtcggc ggccgcgccgagaccaccctgttcgcccccgtcacccacgccgagcggatgctcagcctc gacaacgtgttcagcgaggaggagctcgacgagtgggccgccaaggtcgagcgcgacgcg gggcgagcttccgtgcgctacctcagcgagctcaagatcgacggtctcgcgatcaacctc cgctacgaggacggcgtgctcgtcaccgcggccacgcgcggcgatggcgtggtcggcgag gacgtgacgcagaacgtgctgcagatcgagtcgatcccgtcgcggctccagggcacgggg catccgcccctcgtcgaggtcaggggcgagatcttcttcccggtcgaggccttcgaggag ctcaaccgcggtcagatcgaggccggggagcgcgtgttcgccaacccccgcaacgccgcc agcggatcgctgaggcagaagcgcgagggcaagaacgaccggcagctggcgctcatgcac gctcggctgtcacggctgcggatgctcgtgcacggcatcggcgcctggccggatccgccg gtcgcggcgcagtccgaggtgtacgacctcctcaagggatggggtctgccgacgtcgacg cactaccgggtgttcgacacgatcgacgaggtcgccgggttcatccgctactacggcgag caccgcgccgccgtcgagcaccagatcgacggcatcgtggtgaaggtcgacgacctcgcg ctgcacgcggagctcggcgccaccagccgtgccccccgctgggccacggcctacaagtac cctcccgaggaggtcaacaccaagctcctcgacatcgtcgtctcggtcggccgcacgggg agggccacgcccttcgccgtgatggagaaggtggaggtggcggggtcggaggtccgccag gccacgctccacaaccaggacgtcgtgaaagccaagggcgtgctcatcggcgacacggtc gtgctccgcaaggcgggcgacgtcatccccgaggtgctcggcccggtggtcgagctccgc gacggcaccgagcgggagttcgtgatgcccgagctctgccccgagtgcgggacccggctc gcccccgccaaggagggcgacatcgacctccgctgcccgaactcgcggagctgccccgcg caggtgcgcgggcgggtcgagcacgcgggctcgcgcggcgcgctcgacatcgaggggctc ggcgaggtctccgcggccgcgctgacgcagccgatcgagccggccaccccgccgctcgtc accgaggcgggcctgttctcgctcaccatgagcgacctcttccccatccgcgcggtcgtc cgcgacaacgagaccggtctcgagaagctcaccgagtctggtgacccgaagctcgtcacc ccgttccgtcggcgccggacgaagaaggatccggccttcgacgagacggccgtgccgggc tcgcccgagttctggggcgacgccgagtccatgccctcgtcggcggccgtcgagctgctg gccaacatcgaggccgcgaagaccaagccgctgtggcgcatcctcgtcgccctcagcatc cggcacgtcggccccgtggcggcgcgggcgctcgccgactggttcggctccctcgccgcc atccgctccgccacccgcgacgagctcgccgccgtcgagggcgtcggcggcatcatcgcc gacgcgctgatcgactggttcacggtcgactggcacgtcgagatcctcgaccgctgggcg gccgcgggcgtgcagttcgccacacccgggcatccggggccgggagcctcggtgggggcg ggcggcgtgctcgaggggctcaccgtggtcgccacgggatcgctcgagggctacacgcgc gaaggggctcaggaggcgatcatcaacgcgggcggcaaggcggcgtcgagcgtgagcaag aagaccgacttcgtggccgccggcccgggcgccggctccaagctcaccaaggcggagcag ctgggcctgcgcatcctcgacgcggccgagttccacctcctcgtcacccagggcccggat gcgctcgctccggccggcgatcccgccgacgacgcggctggcgaggcccacgaggacgct ccggcacaggaggacgacgggcccgccgagtag

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