Humibacter ginsenosidimutans: FPZ11_01670
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Entry
FPZ11_01670 CDS
T06119
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
huw
Humibacter ginsenosidimutans
Pathway
huw00300
Lysine biosynthesis
huw00550
Peptidoglycan biosynthesis
huw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
huw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FPZ11_01670
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FPZ11_01670
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
huw01011
]
FPZ11_01670
Enzymes [BR:
huw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FPZ11_01670
Peptidoglycan biosynthesis and degradation proteins [BR:
huw01011
]
Precursor biosynthesis
Amino acid ligase
FPZ11_01670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Methyltransf_28
Motif
Other DBs
NCBI-ProteinID:
QDZ13674
UniProt:
A0A5B8M161
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Position
341162..342709
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AA seq
515 aa
AA seq
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MTGTGTAMLRPEHPVPRSLSQLVADFGFEASERVDSVEVSGVTVSSAAVEPGDLYVGLPG
TRVHGASFAADAAASGATAVLTDAAGAVLAEGAGLPVLVTEDPRAALGDVAAWVYRTEEN
TATFFAVTGTNGKTSVVYVITAVLGQLGVRSGLSSTAERRIGDVAVTSSLTTPEASELHG
LLARMREAEVRAAAVEVSAQALSRHRVDGIVFDVAGFTNLSHDHLDDYASMDEYYAAKLE
LFTPDRARRAVVTIDDEWGRRLADESRIPVTTLTSVEGIDADWRVELGEQTIDRTGFTLV
GPDGRSLTTSIPVLGAFMATNAALAIVMLVESGFDLEAIGQALERDGGIQAYIPGRAERV
SGERGPALFVDYGHTPDAFERALSSLRVVTPGRIIMVFGADGDRDTTKRAAMGAIAARGA
DEVIITDFHPRYEDPAAIRAALIAGALDAVPDAEVLEVADQRAAIRTAIQHATEGDVIFY
AGPGHEDYQEVAGVHLPYSARDDARLALREAGWLS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggaacgggcaccgcaatgctgcgcccagaacaccccgtcccccggtccctgtcg
cagctggtggccgacttcgggttcgaggcgtcggagcgggttgattcagtcgaggtcagt
ggcgtgaccgtcagctcggcggccgtcgagccgggcgatctctatgtcgggcttcccgga
accagggtgcacggggcatccttcgccgccgacgccgcggcctcaggcgcgaccgccgtg
ctgacggatgccgccggcgcggtcctcgccgaaggcgccggtctgccggtgctcgtcacc
gaagacccgcgcgcggctctcggcgacgtcgccgcatgggtgtaccgcaccgaggagaac
acggctaccttcttcgccgtcaccggaaccaacggcaagacgagcgtcgtctacgtgatc
acggccgtgctgggacagctcggcgtgcgctcgggtctcagttcgacggcggagcgtcgc
atcggcgacgtcgccgtcacgagttcgctgacgacgccggaggcgagtgaactgcacggc
ctcctggccaggatgcgcgaggccgaggtgcgcgccgccgccgtcgaggtgtcggcacag
gcgttgagccgccatcgcgtcgacggcatcgtcttcgacgtggccggattcacgaacctg
agccacgaccacctcgacgactacgcgtcgatggacgagtactacgccgccaagctcgag
ctgttcacgccggacagggctcgtcgggctgtcgtcacgatcgacgacgagtggggaagg
cggctcgcggacgagtcgcgcatccccgtcaccacgctgaccagcgtcgagggcatcgac
gcggactggcgtgtcgagctcggggagcagacgatcgatcgcaccgggttcacgctcgtc
gggcccgacggacgatcgctgaccacgagcatcccggtgctgggcgccttcatggcgacg
aacgcggcgctcgcgatcgtcatgctcgtggagtcgggcttcgatctcgaggccatcgga
caggcgctcgaacgcgacgggggcatccaggcctacattcccgggcgtgccgaacgcgtc
tcaggcgaacgcggccccgcgctcttcgtcgactacggacacacccccgacgcgttcgag
cgggcgctctcctcgctgcgcgtcgtcacccccgggcgcatcatcatggtgttcggcgcc
gacggcgacagagacaccaccaagcgagcagcgatgggcgcgatcgcggcgcgcggtgcc
gacgaggtgatcatcaccgacttccacccccggtacgaggaccccgcagccatccgcgca
gcgctcatcgcgggggcgctggatgccgtccccgacgccgaggtgctcgaggtcgccgac
cagcgtgcggccattcgcaccgccatccagcacgccacagaaggagacgtcatcttctac
gccggacccggccacgaggactaccaggaggtcgcgggagtgcacctgccctattccgcc
agggacgacgcgcgactcgccctgcgcgaagcggggtggctttcgtga
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