Hordeum vulgare subsp. vulgare (domesticated barley): 123400953
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Entry
123400953 CDS
T11213
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123400953
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hvg01007
]
123400953
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvg03016
]
123400953
Enzymes [BR:
hvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
123400953
Amino acid related enzymes [BR:
hvg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123400953
Transfer RNA biogenesis [BR:
hvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
123400953
Prokaryotic type
Other AARSs
123400953
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
Motif
Other DBs
NCBI-GeneID:
123400953
NCBI-ProteinID:
XP_044950603
UniProt:
A0A8I6YVW7
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Position
6H:527540348..527554931
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AA seq
1065 aa
AA seq
DB search
MDAASCCRVFSTQRCRFPLRRLGAAPVAARRPFSTELSDLFAPSSSASKRRSRGPVMAAK
KAAEGAKQEDGKYKHTVDLPKTSFGLRANSVMREPELQKLWEENQVLKRVSERNTGATFT
LHDGPPYANGDLHMGHALNKVLKDIINRYKLLQNHKVSFIPGWDCHGLPIELKVLKSMDK
ATLDALTPIKLRQKAAKFAKATVNAQMNSFKRIGIWADWDNPYLTLSPEYEAAQLEVFGQ
MVMRGYIYRGRKPVHWSPSSRTALAEAELEYSENHVSKSIYAAFKITSPSNSGLLDEFLP
NVCLAIWTTTPWTIPANAAVAVNPELSYAVVELQPVLESESTSGGKQRKLGSIFSSGNEK
PFIIVASDLVSVLESKWGVKLVIRKSFPGSVLEHCRYLHPVNGNECSVVIGGDYITTESG
TGLVHTAPGHGQEDYLTGLKYGLPIVSPVDDEGNFTAEAGQFSGLSVLGAGNAAVVKYLD
EHVSLILEEPYKHKYPYDWRSKEPTIFRATEQWFASVDGFRDAALDAIKRVTWVPSQGEN
RIVNMISGRSDWCISRQRTWGVPIPVFYHVDTQEPLITEETIEHIKAIVSEKGSDAWWYM
PTEQLLPEKYRDKASEYRKGTDTMDVWFDSGSSWAAVSAKRDGLNFPADVYLEGSDQHRG
WFQSSLLTSIATTGKAPYSSVITHGFVLDEDGFKMSKSVGNVVDPEKVIVGGKNSKEEPP
YGADVLRLWVSSVDYTGDVLIGSQILRQMSDMYRKLRGTMRFLLANLHDWKPENSVPYSD
LPKIDQYALFQLENVVASMKDSYDHYQFYKIYQTLQRFAIVGLSNFYFDVAKDRLYVGGR
VSYTRKSCQTVLAAHLLYLVRAIAPIMPHLAEDIWQNLPFQHTLEDGSVAEFAFDLKWPD
RNEEWCSVQKDDVDFLSVILELRSEVNKILESARTGKLIGASLDAKVYLHAENPDTVSKL
KELASATNDADALHRLFITSQVEILPSLSEETTSGVSYTGKFSNPLTGEIWIGVTRADGV
KCERCWVYTKDVGLFVDHPTLCSRCHGVIDLQPQTSPAAATAAVA
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcctcctgctgtcgcgtcttctcgacgcagagatgccgcttcccgctgcgc
aggctgggggcggcgccggtggcggcgcggcggccgttctccaccgagctgagcgacctc
ttcgccccgtcgtcgtcggcctcgaagcgccggtcccggggccccgtcatggccgcgaag
aaggccgcggagggtgcgaaacaagaagatgggaaatacaagcacacggtggacctccca
aagacgagtttcggcttgagagcaaactctgttatgcgcgagccggagctccagaagttg
tgggaggagaaccaggtgctgaagagggtgtccgaaaggaataccggggctacatttact
cttcatgatgggccgccttatgctaatggtgatcttcacatgggtcatgcgctgaataaa
gttctcaaagatattataaatcgctacaagctgcttcagaaccacaaggtttcctttatt
cctgggtgggattgccatggccttccgatagaattaaaagttctgaagtcaatggacaaa
gcaacattggatgctctaacacctataaaattaaggcaaaaggctgcaaaatttgctaaa
gcgaccgttaatgcacaaatgaattctttcaagcgcatcgggatatgggcagattgggac
aacccttacctaactctgtcgccagaatatgaagctgctcagttggaagtgtttggtcaa
atggttatgagaggatatatctatagaggacgaaagcctgtccattggagtccatcctca
cgcaccgctttagcagaagctgagttagagtattcggaaaatcacgtttccaaaagcata
tatgctgcattcaagattaccagcccgtctaactctgggttgctagatgaatttctccct
aatgtttgcttggccatatggaccactactccatggacaattcctgctaatgctgctgtt
gcagtgaaccctgagcttagttatgcagtagttgagctccagcctgtactggaaagtgag
tcaacatccggaggaaagcaacgaaaacttgggagtattttcagctctgggaacgagaaa
ccatttatcatcgtggcttctgatcttgtctcagttctagagtccaaatggggtgtgaag
cttgtaatccggaaatcatttcctggttcagtcttggaacactgcagatacctccatcct
gtgaatggcaatgaatgttctgttgtcattggaggagattacataacaactgaatctgga
actggccttgttcacactgcccctggccatggtcaggaagactacctaacaggactgaaa
tatggtcttcctattgtttctcccgtggatgatgaagggaacttcactgctgaagctgga
caatttagtggtttatctgtcctgggagctggtaatgctgcagttgtgaagtatctggac
gaacatgtttcacttatcttagaagagccttacaaacacaagtacccctatgactggaga
tctaaagaaccaaccatattccgagcaactgaacagtggtttgcctccgtggatggtttt
cgggatgctgcactggatgcaatcaagcgagtaacttgggttccttctcagggtgaaaac
aggattgttaacatgatctctggccgttctgactggtgtatttcccggcagagaacatgg
ggagttcccattcctgttttttatcatgtagacacacaagaacctcttataactgaagaa
acgattgagcatatcaaggctatagtgtcagagaaaggcagtgatgcctggtggtatatg
ccaactgagcaacttcttccagagaaatatcgtgacaaagcatctgagtatcgcaagggc
actgatacaatggatgtttggttcgactctggctcctcatgggctgctgtttcagcaaaa
cgggatggccttaatttccctgcagatgtataccttgaaggttcagaccaacatcgtgga
tggtttcagagttcgttgttaaccagcatcgctactacaggaaaggctccatattccagt
gttattacccatggtttcgtattggacgaagacggtttcaaaatgagcaaatctgtcggt
aatgtggtggatcctgagaaagtgattgttggtgggaaaaattctaaggaagagcctcct
tatggagcagatgttctccgtctatgggtttctagtgttgattacactggagatgtgttg
attggttcgcaaatcttacgccagatgtctgacatgtataggaaactacgaggcacaatg
cgttttctgttagcaaatctccatgattggaaaccggagaattctgtgccctacagtgat
ctgccaaaaattgaccagtacgcacttttccaactggaaaatgtcgtggcttccatgaag
gatagttacgatcattaccaattctataaaatataccagacccttcagagattcgccatc
gttggtttgtccaatttctattttgatgttgcaaaagaccgactttatgttggtggccgg
gttagttacacaaggaaaagctgccagacagtccttgctgcacatctactctaccttgtt
agggccattgctccgattatgccacacttagcagaggatatttggcagaacttgcccttt
caacacaccttggaagatggatctgttgccgagtttgctttcgatctaaaatggccagat
aggaatgaagaatggtgctcagttcaaaaggatgatgttgattttctgagtgttatcctg
gagttgagatcagaggtgaacaagattttggagagcgctagaacaggaaagctgataggc
gctagtttggatgcaaaggtttatctccatgctgaaaatcctgatacggtatccaaactg
aaggagctggcttctgcaaccaatgatgcagatgctcttcatcgcctatttatcacatcc
caggtcgagattctcccatccctgagtgaagaaaccacatcaggtgtgtcctacacggga
aagttcagcaatccactaacgggggagatctggatcggtgtgactcgtgcggatggcgtg
aaatgcgagcgctgctgggtttacaccaaggacgttgggttgttcgttgaccatcctacg
ctatgttcgcggtgccacggcgtcattgatctgcaaccgcaaacgtctcctgccgctgcc
accgccgctgtcgcttga
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