KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123402745
Entry
123402745         CDS       T11213                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03420  Nucleotide excision repair
hvg04120  Ubiquitin mediated proteolysis
hvg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123402745
   04120 Ubiquitin mediated proteolysis
    123402745
  09124 Replication and repair
   03420 Nucleotide excision repair
    123402745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hvg04121]
    123402745
   03400 DNA repair and recombination proteins [BR:hvg03400]
    123402745
Enzymes [BR:hvg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     123402745
Ubiquitin system [BR:hvg04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   123402745
  Multi subunit type E3
   SCF complex
    Ring finger protein
     123402745
   Cul2 complex
     123402745
   Cul3 complex
     123402745
   Cul4 complex
     123402745
   Cul7 complex
     123402745
   Cul8 complex
     123402745
   Cul9 complex
     123402745
DNA repair and recombination proteins [BR:hvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123402745
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123402745
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 123402745
NCBI-ProteinID: XP_044952630
UniProt: F2DWU2
LinkDB
Position
6H:465742590..465745433
AA seq 116 aa
MDQGDVAVAVAPGAPSSSCAGAGCKKGKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggaccagggcgacgtcgccgtggccgtggcccccggcgccccctcctcctcctgcgcc
ggcgccggctgcaagaagggcaagcgcttcgagatcaaaaagtggaacgccgtcgcgctc
tgggcctgggacatcgtggtcgacaactgcgccatctgccgcaaccacatcatggacctc
tgcatcgagtgccaggcgaaccaggccagcgccaccagcgaggagtgcaccgtcgcttgg
ggagtttgcaaccatgcattccacttccactgcatcagccgttggctcaagacccgtcaa
gtgtgccctctagacaacagcgagtgggagttccagaagtatggtcactaa

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