Hordeum vulgare subsp. vulgare (domesticated barley): 123410993
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Entry
123410993 CDS
T11213
Name
(RefSeq) 4-coumarate--CoA ligase-like 3
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00130
Ubiquinone and other terpenoid-quinone biosynthesis
hvg00940
Phenylpropanoid biosynthesis
hvg01100
Metabolic pathways
hvg01110
Biosynthesis of secondary metabolites
Module
hvg_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
hvg_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
123410993
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
123410993
Enzymes [BR:
hvg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
123410993
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Glyoxalase_6
Motif
Other DBs
NCBI-GeneID:
123410993
NCBI-ProteinID:
XP_044959848
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Position
1H:complement(359175549..359179683)
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AA seq
604 aa
AA seq
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MRICRFSGYVNFSVDHDLSSKYSPNYSRRSAAAAMQDAADDPSAAAAFYSAAAGLYASTH
PPVPLPVDPGLSLVPHIFSRLPLGPPPHSRPCLLDAATAASLSRADLRRLVASLARGLRR
AHGVRAGAVVLLVLPNSVAFPVAFLAVLAAGGVATTMNPSSSGAEIAGRLRDTAPSLVLA
SPDNAAKVPPSAAAPVVLVPETFHPSPSTGNEFAPFRALLDSDADDGLPSAEVGQDDAAA
VLYSSGTSGRSKGVVLTHRNLITMVELFVCFEASQYARPACDNVYLAVLPMFHVYGLSLF
AAGLLSLGSTVVVMRRFDVGDAVRAIHKYKVTHLPLVPPIMAALLRARATGASSLESLVQ
VSSGAAPLSGKLVQDFLKAFPHVDFIQGYGMTESTAVGTRGFNTSKHKKYASVGLLAPNM
HAKIVDLETGLCLPPGSCGELWLHGPAIMKGYLNDEDTCMRNDGWFQTGDLAYFDSDGYL
YIVGRLKDTIKYKGFQIAPADLEAVLVQHPEIVDVAVTSVEDEEAGEIPVAFVVRRSGSH
LTCVQVMEYVAKQVSPYKKVRKVIFVEAIPKSAAGKVLRRLLKDSLRLDAAASRSDHTKP
SSRL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatttgccgcttcagcggctatgttaacttctcggtggatcatgacttgagtagt
aagtatagcccaaactacagcagaagatcagcagctgcagcaatgcaggacgccgcggac
gaccccagcgccgccgccgccttctactcggccgccgccggcctctacgccagcacgcac
ccgcccgtcccgctccccgtcgacccgggcctctccctcgtcccgcacatcttctcccgc
ctccccctcggcccgccgccgcattcccgtccgtgcctcctcgacgccgccaccgccgcc
tccctctcccgcgccgacctccgccgcctcgtcgcctccctcgcgcgcggcctccgccgg
gcccacggcgtccgcgccggcgccgtcgtgctcctcgtcctccccaactccgtcgccttc
cccgtcgccttcctcgccgtcctcgccgccggcggcgtcgccaccaccatgaacccctcc
agctccggcgccgagatcgccggccgcctgcgggacaccgccccgtccctcgtgctcgcg
tcgcccgacaacgccgccaaggtcccgccctccgccgccgccccggtcgtcctcgtgccg
gagacgttccatccctcgccctcgacgggcaacgagttcgcgcccttccgcgcgctgctc
gattccgacgccgacgacggcctcccgtcggcggaggtcggccaggacgatgccgccgcc
gtcctctactcctcggggaccagcggccggagcaagggcgtcgtgctcacgcaccgcaac
ctcataaccatggtcgagctcttcgtgtgcttcgaggcgtcgcagtacgcgcgacctgct
tgtgacaatgtctacctggccgtgctgcccatgttccacgtctacggcctctccctcttc
gccgcgggcctcctctcgctcggctccaccgtggtggtcatgaggaggttcgacgtcggc
gacgccgtcagggcgatccacaagtacaaggtcacgcacttgccgctcgtgccgcccatc
atggcggcgctgctcagggccagggccacaggcgcctcgtcattggaatccctggtgcag
gtctccagcggcgcagctccactcagcggcaaactcgttcaagactttctcaaggctttc
ccacacgtcgatttcattcagggctatggcatgactgaatctactgctgtgggaactcgt
ggcttcaatacctccaagcacaagaaatatgcatctgtaggtcttttagccccaaacatg
catgccaaaattgttgatctggaaactggcttatgtttacctcctggctcttgtggggag
ttatggctccatgggccagctataatgaaaggttacctgaatgatgaggacacatgcatg
agaaacgatggctggtttcagactggtgaccttgcttactttgattcagatgggtacttg
tacatagtgggccgtttgaaagacactatcaagtacaaaggatttcagatagctccagct
gaccttgaagcagttttggtgcagcaccctgaaattgttgatgttgctgtgacatccgtt
gaagatgaagaagctggagagataccagtagctttcgtggtgaggagatctggaagccat
ctcacctgtgtgcaagtgatggagtatgtggccaagcaggtgtccccgtacaagaaagtt
cgcaaggtgatattcgttgaggcaatacccaagtcagcggctggcaaggttctgagaagg
cttctcaaggactctctgcgccttgatgccgctgcttcccgttctgatcacaccaaaccc
agttcaaggctgtaa
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