Hordeum vulgare subsp. vulgare (domesticated barley): 123426286
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Entry
123426286 CDS
T11213
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123426286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123426286
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123426286
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
MRP-S26
Motif
Other DBs
NCBI-GeneID:
123426286
NCBI-ProteinID:
XP_044966020
UniProt:
M0Z576
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All DBs
Position
2H:complement(358529151..358533092)
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AA seq
362 aa
AA seq
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MDDGATPPPNHKRHLPLREAGGDLVELLWQNGAIVAQAQAQTPHRRCSQSGAASGVTAED
ATAWLIPDGGGGRDLYSHLWHGVADGDAGALVAGSGGAGTSFCGSNAVTAPALLPSPGSS
AAGGQALLFKRGRDQLDSRREDELDTDDCEAVNETRPQRPAAKRRTRAAEVHNQSERRRR
DRINEKMKALQELVPHCNKSDKASILDEAIEYLKSLQLQVQIMWMTTGMTPMMYPGAHQL
MSPMAVGLNSACIPTAQSLSQLQKRVAPFMNNHLPDQMPQVQSPAIDSLDVANQMQNNGV
CGEPRNPFLHPDDTLTAASQLPGMLPYASQKAQQNQNHQLLPSIDMPASGPCPPSFADGT
GK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggcgcaacaccgccgcccaaccacaagaggcacctcccactgcgggaggcg
ggcggcgacctcgtggagctgctgtggcagaacggagccatcgtagcgcaggcgcaggcg
cagacgccgcaccgccggtgttcccagagcggcgcggcgagcggcgtcaccgcggaggac
gcgaccgcgtggttgatcccggacggcggcggcggcagggacctgtactcgcacctctgg
cacggcgtcgccgacggggatgcgggcgcgctcgtggcggggagcggcggcgccgggacg
agcttctgcgggagcaacgcggtgacggcgccggcgctgctgccatcgccgggctcgtcc
gcagcgggaggccaagcgctactgttcaagagggggagggaccaactggatagccgccga
gaggacgaactggataccgacgactgtgaggccgtcaatgagacccggccgcagcggccg
gcagcgaagcgcaggactcgtgctgccgaggtccataaccaatcagagcggagaagaagg
gatcggatcaacgaaaagatgaaagcattgcaagaactcgtaccccattgcaacaagagc
gacaaggcgtccattctagacgaagcaatcgagtacttgaagtctctgcaactgcaagtt
cagatcatgtggatgactactgggatgacgcccatgatgtaccctggtgctcaccaactc
atgtcgccgatggccgtgggcttgaactcagcgtgcattcccacggcgcagagccttagc
cagctgcaaaaaagggtagcaccgtttatgaacaatcatctccccgatcaaatgcctcag
gtccaatctccagctatcgattccctcgatgtggcaaaccagatgcaaaacaatggtgtc
tgtggtgagccaagaaaccctttcctgcatccagacgacacgctaacagcggcatctcag
cttccgggtatgttgccctatgcatctcaaaaggcacaacaaaaccagaatcatcagtta
ctgcctagcatagacatgccagcttcaggaccctgcccgccatcttttgctgacggaacg
ggaaaataa
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