Hordeum vulgare subsp. vulgare (domesticated barley): 123430073
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Entry
123430073 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34-like
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123430073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123430073
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123430073
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123430073
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-C3HC4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
123430073
NCBI-ProteinID:
XP_044969926
UniProt:
F2DWE8
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All DBs
Position
1H:complement(250430423..250433694)
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AA seq
265 aa
AA seq
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MDLGAEQHGCEHYTRRCRIRAPCCGEVFGCRHCHNQAKNSLEVDVLDRHDIPRHEISKVI
CSLCNKEQDVQKNCSGCGACMGKYFCEKCNFFDDDISKNQYHCDGCGICRTGGMDNFFHC
EKCGCCYSNVLKDSHHCVERAMHQNCPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVH
HHFSCPVCSRSACDMTDAWQKLDQEVAATPMPEFYQKKMVWILCNDCGATSSVRFHVLAQ
KCPGCSSYNTRETRGGPATVACSRV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggatttgggggcagagcagcacggctgcgagcattacacgaggaggtgcaggatacgg
gcgccctgctgcggcgaggtcttcggctgccggcattgccacaaccaagctaagaattcg
ctcgaggtggacgtcctcgaccggcacgacatcccccgccacgaaatcagcaaggtcatc
tgctctctctgcaacaaagaacaggatgtgcagaagaactgctccggttgtggggcatgc
atggggaaatacttctgtgaaaaatgcaacttctttgacgatgatatctcaaagaaccag
tatcactgcgatggatgcggcatctgcagaactggtggcatggacaatttcttccactgc
gaaaaatgcgggtgttgctacagcaatgttttgaaggactctcatcattgtgtagagaga
gcaatgcatcaaaactgccctgtctgctacgagtatctatttgactcgaccatggacatc
agcgtactgcactgcgggcacacgatccatttggagtgcctgaacgagatgagggttcat
caccacttctcgtgcccggtctgctcgcggtcggcctgcgacatgaccgatgcgtggcag
aagctcgaccaggaggtcgccgccacacccatgccagagttctaccagaagaagatggta
tggatcctctgcaacgactgcggggcgacgtcgagcgtgcgcttccacgtcctggcgcaa
aagtgtcccgggtgcagctcttacaacaccagggagacgaggggcggcccggctacggtg
gcatgctccagagtctga
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