KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123442346
Entry
123442346         CDS       T11213                                 
Name
(RefSeq) RING-box protein 1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03420  Nucleotide excision repair
hvg04120  Ubiquitin mediated proteolysis
hvg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123442346
   04120 Ubiquitin mediated proteolysis
    123442346
  09124 Replication and repair
   03420 Nucleotide excision repair
    123442346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hvg04121]
    123442346
   03400 DNA repair and recombination proteins [BR:hvg03400]
    123442346
Enzymes [BR:hvg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     123442346
Ubiquitin system [BR:hvg04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   123442346
  Multi subunit type E3
   SCF complex
    Ring finger protein
     123442346
   Cul2 complex
     123442346
   Cul3 complex
     123442346
   Cul4 complex
     123442346
   Cul7 complex
     123442346
   Cul8 complex
     123442346
   Cul9 complex
     123442346
DNA repair and recombination proteins [BR:hvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123442346
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123442346
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 123442346
NCBI-ProteinID: XP_044974291
UniProt: A0A8I6XMW5
LinkDB
Position
3H:complement(982668..985034)
AA seq 119 aa
MSAMETDTPDAAPPAPAGDAAGSSSSRKPGKRFEIKKWNAVALWAWDIVVDNCAICRNHI
MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 360 nt   +upstreamnt  +downstreamnt
atgtctgccatggagaccgacacccccgacgcggcgccgccggcccccgccggcgatgcg
gccgggtcgtcgtcgtcccgcaagcccggcaagcgcttcgagatcaagaagtggaacgcc
gtcgcgctatgggcctgggacatcgtggtggacaactgcgccatctgccgcaaccacatc
atggatctatgcatcgagtgccaggccaaccaggccagcgctaccagcgaggagtgcaca
gtcgcatggggtgtctgtaatcatgctttccacttccactgcatcagcaggtggctcaag
actcgccaagtgtgcccactagacaacagcgaatgggagttccagaaatacggccactag

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