Hordeum vulgare subsp. vulgare (domesticated barley): 123443767
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Entry
123443767 CDS
T11213
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00906
Carotenoid biosynthesis
hvg01100
Metabolic pathways
hvg01110
Biosynthesis of secondary metabolites
Module
hvg_M01040
Lutein biosynthesis, plants, lycopene => lutein
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
123443767
Enzymes [BR:
hvg01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
123443767
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
Thi4
FAD_binding_2
Pyr_redox_3
NAD_binding_8
FAD_binding_3
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-GeneID:
123443767
NCBI-ProteinID:
XP_044976228
UniProt:
A0A287L0H0
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Position
3H:complement(332541563..332551724)
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AA seq
536 aa
AA seq
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MESTGAAISAPFGCRALRWAGQRPLRAADARRRRVSPGPGAEQWRSLKASCVATEKPDEK
AAPGLGVDFADEEDYVKGGGGELLYVQMQATKAMESQSKIASKLLPIADETSVLDLVIIG
CGPAGLSLAAESAKKGLTVGLIGPDLPFTNNYGVWEDEFNDLGLESCIEHVWKDTVVYLD
RNKPIMIGRAYGRVDRDLLHEELLRRCHEVGVTYLNSKVEQIIESPDGHRVVYCGRDRKI
LCRLAIVASGAASGKLLEYEVGGPRVCVQTAYGVEVEVERYPYDPSLMVFMDYRDCFKEK
FSHPEEANPTFLYAMAMSSTRVFFEETCLASKDAMPFDLLKKRLMSRLDAMGVRILKVYE
EEWSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISDILGNRVY
SGQYLPGSSEMSSPSMLAWGTLWPQERKRQRSFFLFGLALIIQLDNEGIQTFFETFFRLP
KWMWRGFLGSTLSSVDLMLFALYMFAIAPNNLRMNLVRHLLSDPTGSAMIRTYLTL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaccggcgccgccatctcggcgccgttcggctgccgcgcgttgcgctgggcc
gggcagcggcctctccgggcggccgatgccaggagaaggcgggtgagtccaggccccggg
gcggagcagtggaggagcttgaaggcgagctgcgtggccacggagaaacccgacgagaag
gcggcgccggggctgggggtggacttcgccgacgaggaggactacgtcaagggcggcggc
ggtgagctgctctacgtgcaaatgcaggccaccaaggccatggaaagccagtccaaaatc
gcctccaagctgttgcctatagctgatgaaacttcagtacttgatttggttattattggc
tgtggtccagccggcctatctctggctgcagaatctgcaaagaaaggactcactgttggt
ctcattggccctgatcttccattcacaaacaattacggtgtatgggaggacgaattcaat
gatctcggcctggagagctgcattgagcatgtctggaaggatactgtcgtatacctagac
cgtaacaagccgataatgattggccgagcatatggccgggtggaccgagacttgctgcac
gaggagttgctgagaagatgccatgaagttggtgttacatacctcaactcaaaggttgaa
cagataatagaatctccagatggacatcgagtagtatattgtggaagggaccgcaagata
ctttgcaggcttgccattgttgcatctggagcagcatctggtaagcttctagagtatgag
gttggaggaccacgtgtttgtgtgcagactgcgtacggtgtagaagtcgaggttgaaaga
tatccgtatgatcccagcttaatggtcttcatggactacagagattgtttcaaagagaag
ttctcacaccctgaggaagccaatccaacatttctttatgccatggccatgtcatccaca
cgagttttctttgaggaaacatgcttagcttcaaaagatgcaatgccctttgatctcctt
aagaagaggttgatgtctcggttggatgcgatgggagtccgtatcctaaaagtatacgag
gaggagtggtcttatattcctgttggaggatccttacctaacacagaccagaaaaatctt
gcatttggtgctgcagcgagtatggtccaccctgcaactggatactcggtggtcagatct
ttgtctgaagctccaagatatgcttctgtgatatctgatatcttaggaaatcgtgtctat
tctggacaatatttgcctggaagttctgaaatgtccagtccatcaatgcttgcatgggga
acactatggcctcaagaacggaaacgtcaacgctcattcttcctctttggattggccttg
ataattcaactggataacgaaggcatccaaacgttcttcgaaacctttttccggttaccc
aaatggatgtggcgaggattccttggttcgacgctgtcgtcagtggatctcatgctgttt
gcactctacatgtttgcaattgcgccaaacaatttgcgaatgaacctcgtcagacacctc
ctctcggaccccactggttcagcaatgatcaggacctacctgaccttgtaa
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