Hordeum vulgare subsp. vulgare (domesticated barley): 123449271
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Entry
123449271 CDS
T11213
Name
(RefSeq) probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial isoform X1
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00540
Lipopolysaccharide biosynthesis
hvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
123449271
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hvg01005
]
123449271
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
123449271
Lipopolysaccharide biosynthesis proteins [BR:
hvg01005
]
Lipid A
123449271
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Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-GeneID:
123449271
NCBI-ProteinID:
XP_044982353
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Position
4H:complement(525544854..525551451)
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AA seq
353 aa
AA seq
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MSTAAAAAARGLKSVTRAAFSWKPVSERQRGTLSLNPGALAGCLTNPFCPSCQTGRAQQT
LAAAVSRSGVGLHSGACATATLLPARAGEGRYFVVEGEGEARVAAELGNAEPQSPLCTTL
RSGSGVARVRTVEHLLSAMEALGVDNCRVEVSGGDEIPLLDGSAQEWVEAIRGAGLCEAD
DIGGQKLEKLAPKIDEPVYLRKDDCFVAAFPSSQTHITYGIDFPKAPAIGCQWFDTFLDA
DVYSSKIAPARTFCIFEEVEKMRGAGLIRGGSLENAMVCSMTGGWLNPPLRFDDEPCRHK
VLDLIGDFSLLAQNGSQGFPIAHVVAYKAGHALHTSFLRHLSGMADVDQGTLA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccgcggccgccgctgcccgaggtctcaaatccgtcacccgcgccgccttc
tcctggaagccggtgagtgagagacagcgaggaactctgtctctaaaccctggagctttg
gctggctgtttgactaaccccttttgcccctcatgccagacgggtcgggcgcagcagacg
ctcgcggcggcggtgagcaggtcgggcgtggggctccactcgggcgcgtgcgccaccgcc
acgctgctccctgcgcgcgcgggcgaagggaggtacttcgtcgtggagggggagggggag
gcgagggtggcggcggagctggggaatgccgagccacagtccccgctctgcaccacgctg
cggagcgggagcggcgtcgcgcgggtgcgcacggtggagcacctgctctcggccatggag
gcgctcggcgtcgacaactgccgcgtcgaggtcagcggcggcgacgagatccctttgctt
gatggatcagcgcaagagtgggtggaggccatacggggtgccggtctgtgtgaggccgat
gatatcggtggacaaaagttggagaaactggcacccaaaatcgatgagcctgtttacctg
cggaaggacgattgctttgtagctgcattcccttcctcgcaaacccacatcacctatgga
attgattttccaaaggcaccagcgattggttgtcaatggttcgatactttcctggatgct
gatgtatactcaagcaagatagctcctgcaagaactttctgtatatttgaagaggttgaa
aaaatgcgtggtgctgggcttataagagggggatcactagaaaatgctatggtttgcagc
atgactggtggttggcttaatccaccacttcgttttgatgatgaaccttgtcgccacaag
gttttggatcttatcggtgatttctcacttcttgctcagaatggcagccagggctttcca
attgctcatgtagttgcctacaaggctggccatgccctgcacaccagttttctacgtcat
ttatcgggaatggccgatgtggaccaaggaacgcttgcttag
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