Haloquadratum walsbyi DSM 16790: HQ_1151A
Help
Entry
HQ_1151A CDS
T00375
Symbol
nthB
Name
(GenBank) endonuclease 3
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HQ_1151A (nthB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hwa03400
]
HQ_1151A (nthB)
Enzymes [BR:
hwa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HQ_1151A (nthB)
DNA repair and recombination proteins [BR:
hwa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HQ_1151A (nthB)
Prokaryotic type
HQ_1151A (nthB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Ogg-HhH
HHH
HHH_5
TPR_26
Acetyltransf_16
HHH_8
DUF2017
DUF2400
WHD_RIOX1
Motif
Other DBs
NCBI-ProteinID:
CAJ51281
UniProt:
Q18DU6
LinkDB
All DBs
Position
209561..210232
Genome browser
AA seq
223 aa
AA seq
DB search
MDIDIRELHRDLVSLHERPDPAHTTDGVRQLLGTILSQSVADAQTARATHALFEAYPDYR
AMETAPHEELADIIEVAGLKNQKAARIQRALTAIRKETGGEYTLMFLANQSTEAAQSWLT
DIKGVGPKTASVVLNFHFEKPTFAVDTHVERLAKRFGLLDSTASNKRAHTELNELVPDDL
KYSLHVLMITHGREYCTAQSPNCANSVCQTYCSCPACDSLDTS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggatattgatattcgcgaactgcaccgcgatcttgtctctttacatgaacgtccagac
ccagcacatactacagatggtgttcgacaacttctcggaacgattctctcacaaagtgtc
gctgatgcccaaactgcccgtgcaacacacgcactatttgaagcatatccagattataga
gcaatggagaccgcaccacatgaagagcttgcagatattatcgaagttgcagggttaaaa
aatcaaaaagcagctcgaatccagcgtgcgttgacggcgattcgtaaggaaacaggtggt
gaatatacacttatgtttctcgctaatcaatcaaccgaggcagctcaatcgtggcttact
gatatcaagggagttggtccaaaaacagcaagtgttgtcttgaattttcactttgaaaag
ccaacgttcgctgtcgatacgcatgttgaacggcttgcaaaacgatttgggcttcttgat
tcaactgcgtcaaataagcgagcacatactgaattaaacgaactggttccggatgatctc
aagtactcactgcacgtgctaatgatcacccatggtcgcgagtattgtaccgctcaaagt
cctaattgcgcaaattctgtctgtcaaacctactgctcatgcccagcatgtgattctcta
gacacatcttaa
DBGET
integrated database retrieval system
