Haloquadratum walsbyi DSM 16790: HQ_1545A
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Entry
HQ_1545A CDS
T00375
Symbol
nthA
Name
(GenBank) endonuclease 3
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HQ_1545A (nthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hwa03400
]
HQ_1545A (nthA)
Enzymes [BR:
hwa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HQ_1545A (nthA)
DNA repair and recombination proteins [BR:
hwa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HQ_1545A (nthA)
Prokaryotic type
HQ_1545A (nthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
ADH_Fe_C
RecR_HhH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CAJ51673
UniProt:
Q18JY1
LinkDB
All DBs
Position
672656..673342
Genome browser
AA seq
228 aa
AA seq
DB search
MGKPRTDRTQQVDTVLRRLAERYPDSTISLQFSNRLELLIAVVLSAQCTDERVNSITADL
FEKYETATDYAAADTDELAEDIYGITFHNNKAGYLKSIGETLAADYDGDVPDTMDELTAL
SGVGRKTANVVLQHGHDVVEGIVVDTHVQRITRRLGLTDEQTPKQIETDLMESVPESEWQ
QFTHLFISHGRETCTAQNPDCTDCILESVCPSSKCDHDIDLASNTPWK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaccgcgtactgatcgtacacagcaagtggataccgttctacgtcggcttgca
gagagatatccagattcgacaatctcacttcagttttcaaatcgactcgaacttctgatt
gctgttgttctttcagcacagtgtactgacgaacgagttaacagtattaccgctgatctg
tttgagaagtacgaaacagcaactgattatgccgctgccgacactgatgagcttgctgaa
gacatctatggaattacatttcacaataacaaagcaggttatctcaaatcaattggtgag
acacttgctgcggattatgatggtgacgtgcctgatacgatggatgaactcactgccctc
tcaggtgttggacggaaaacggcaaatgtggtcttacagcatggacatgatgttgttgag
ggcatcgttgttgatacacacgtgcagcggataacccgccgacttggactcacagacgaa
caaacaccgaaacagattgagacagaccttatggaatctgtcccggagtccgaatggcag
caattcacacatctatttattagtcatggacgagaaacttgtacagcacaaaaccctgac
tgtacagactgtattcttgaaagtgtctgtccatcctcaaaatgtgatcatgatattgat
cttgcctcaaatacaccatggaaataa
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