Hwangdonia sp. SCSIO 19198: RNZ46_16855 Help Entry RNZ46_16855       CDS       T09455                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism hws  Hwangdonia sp. SCSIO 19198 Pathway hws03030   DNA replication hws03410   Base excision repair hws03420   Nucleotide excision repair hws03430   Mismatch repair Brite KEGG Orthology (KO) [BR:hws00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     RNZ46_16855 (ligA)    03410 Base excision repair     RNZ46_16855 (ligA)    03420 Nucleotide excision repair     RNZ46_16855 (ligA)    03430 Mismatch repair     RNZ46_16855 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hws03032]     RNZ46_16855 (ligA)    03400 DNA repair and recombination proteins [BR:hws03400]     RNZ46_16855 (ligA) Enzymes [BR:hws01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      RNZ46_16855 (ligA) DNA replication proteins [BR:hws03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      RNZ46_16855 (ligA) DNA repair and recombination proteins [BR:hws03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      RNZ46_16855 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      RNZ46_16855 (ligA)    MMR (mismatch excision repair)     DNA ligase      RNZ46_16855 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       RNZ46_16855 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD BRCT_2 PTCB-BRCT HHH Auto_anti-p27 5_3_exonuc Motif Other DBs NCBI-ProteinID:  WOD43656 UniProt:  A0AA97EMG7 LinkDB All DBs Position complement(3899204..3901204) Genome browser AA seq 666 aa AA seqDB search MNIKQHIQNLRNVLREHNYNYYVLDNPTISDYDFDIKLKELQELEAKHPEFFDANSPSQR VGGEVTKNFETIAHEHRMYSLDNSYSKQDLQDWETRIKKLVDGAIQYTCELKYDGASISL TYENGLLTKAVTRGDGFQGDNVTANVKTIKSVPLQLKGDYPPKFDIRGEIVLPFDGFHKM NEERIALGEEPYRNPRNTASGSLKLQDSAEVAKRPLECLLYNITGANLGITTQFESLEKA RQWGFKVPDAAKLANSIDDVLEFINYWNVHRHDLPYETDGVVVKVNSLQQQEELGYTAKA PRWAMAYKFKAEQVSTRLNEITYQVGRTGAITPVANLEPVELAGTTVKRASLHNADQIEK LDIRVGDTVFVEKGGEIIPKIIAVDLTKRNPDSVPTQYITHCPECQTELVRQEGEAQHYC PNYNGCKPQIIGRIQHFISRKAMDIEGLGGETVALLVNEGLIDNYSDLYELTKEQVLPLE RMAEKSAENLVAGIEVSKQIPFERVLFALGIRFVGETVAKKLAKHYKSIDAIAQASEEDL VNVDEIGVKIAQSVTAFFQDEKNVSIVNRLKQFGVQLEISADQLKGQTNILQGQSIVVTG VFESISRNDLKKLIEDNGGKVSNSISSKTSYIVAGANMGPSKKLKAEQLNIDIISEYEFL QKVDRN NT seq 2001 nt NT seq  +upstreamnt  +downstreamnt atgaatataaaacaacacatacaaaacctgcgtaacgtattacgcgagcacaattacaat tactacgtcctcgataatcccaccatttcagattacgatttcgatataaagctaaaagaa ctccaagagctggaagctaagcatcccgagttttttgatgccaattcgccatcccaacgt gttggaggcgaagtcaccaaaaattttgaaaccattgcgcacgagcaccgtatgtattcg ttggataattcgtattctaaacaagatttgcaagattgggaaacccgcattaaaaagttg gttgatggcgctattcaatacacttgcgaattaaaatacgatggggcttctataagttta acctacgaaaacggactattgaccaaagccgtcacccgaggcgacggatttcaaggcgat aatgtaacggcaaacgtaaaaaccataaaatcggtgccgctacagttaaaaggtgattat ccaccaaaattcgatattcgtggcgaaattgttttgccctttgatgggtttcataaaatg aacgaggagcgtattgcattgggcgaagaaccctaccgtaacccaagaaatacggcgtcg ggaagtttaaagcttcaggatagtgccgaagtagcaaaacggccgctggaatgtttattg tacaatattacgggggcaaacttgggtattacaacccaatttgaaagtttggaaaaagca agacaatgggggtttaaggtgccagatgctgcaaaacttgcgaattccattgatgacgtt ttggagtttataaattattggaatgtgcaccgacacgatttaccttatgaaaccgatggg gtggtagttaaagtgaatagcttgcaacaacaagaggagttgggctataccgcgaaagca ccgcgttgggctatggcgtacaaatttaaggccgaacaggtttcaacgcggctaaacgaa attacgtatcaagttgggcgcacgggagccattacgcctgtggctaatttagagccggta gagttggctggtacaaccgtaaagcgggcgtcgttacataatgccgaccagatagaaaaa ttagacattagagtaggggatacggtttttgttgaaaaaggcggggaaattatcccaaaa attatcgctgttgatttaacaaaacgtaacccagattctgtcccaacccaatacattacg cattgtcctgaatgccaaactgaattggtgcgacaagaaggtgaggcacagcattattgc cccaattacaatggttgtaaacctcaaattatcggtcgtattcaacattttatatctaga aaagctatggatattgaaggcttaggtggtgaaaccgtagcgcttttggtcaatgaaggt ttaattgataactattctgatttatacgaattaacaaaagagcaagtattgcctttggag cgcatggcagaaaaaagtgcagaaaacttggttgcaggtattgaagtgtcaaagcaaatc ccttttgaacgtgttttgtttgctctcggtatccggtttgttggagaaacggttgccaaa aaattagctaaacattataaaagtattgatgctattgcccaggcatcagaggaagatttg gtaaatgttgatgaaataggcgttaaaatagcacaaagtgttaccgctttttttcaagat gaaaagaatgtttcaattgtaaataggttaaaacagtttggagtccagttggaaatatca gcagatcaacttaaagggcaaactaatattttacaagggcaatccattgtggtaaccggt gtttttgaatctatttccagaaatgatctaaaaaaacttatcgaagacaatggtggtaag gttagtaattccatttcttcaaaaacgagttatatcgttgcaggtgctaatatgggacca agtaaaaaactaaaggctgaacaactaaatatagatattattagcgaatatgaattccta caaaaagttgatagaaactag

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