Halosquirtibacter xylanolyticus: K5X82_04960
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Entry
K5X82_04960 CDS
T10547
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hxy Halosquirtibacter xylanolyticus
Pathway
hxy01501
beta-Lactam resistance
hxy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hxy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K5X82_04960
01503 Cationic antimicrobial peptide (CAMP) resistance
K5X82_04960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hxy02000
]
K5X82_04960
01504 Antimicrobial resistance genes [BR:
hxy01504
]
K5X82_04960
Transporters [BR:
hxy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K5X82_04960
Antimicrobial resistance genes [BR:
hxy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K5X82_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF7369
Sterol-sensing
Tweety
Motif
Other DBs
NCBI-ProteinID:
QZT38253
LinkDB
All DBs
Position
complement(1452865..1455969)
Genome browser
AA seq
1034 aa
AA seq
DB search
MISKYFIQRPILSTVVSLIIVILGGVSLLKLPVNQYPNITPTNVSVNATYPGASSEIIAN
TVGAPLEQAINGVEGMTYMSSVSNNDGSYQLTVTFEVGTDVNMATVLVQNKVNQALPKLP
EIVQTLGVTTDKKSTDMVSIMGLNSKDPTVPLSFLTNYASTYIVDELKRIPGVASITVFG
AGDYSIRLWLDPVKLKNRNLTPADVRRAIKNQNLQVASGQLGASPTASNQQMQLSLIVSP
GRMTKESEFENIVIKTDANGNTIYLKDIAKVELGSKSYRRTVKRDGRRVSAAIAVYQLPG
GNALDIHEAINNKFDELSQSFPPDFEYSEITNTTDFVKASIHEVTLTLFIAFVLVCLVLL
IFLQDWRATLVPVITIPVSIIGTFGALAAFGFSINLLTLFAMVLAIGIVVDDAIVVVENT
ARHIDLGESPKRAAIIAMSEVTGPIIATTLVLMSVFLPPAFMGGITGELYKQFALTIAAS
TLLSAINALTLSPALSAMFLRKTKEGEKKGFVYRKFNQFFDRLTSSYSNLLGRIARKSVI
SLVMFAIIGVVSLVVFKSLSTSFIPNEDQGRIFVEISLPNAASDNRTAEVLAEVDKQLQT
IDGIHTFMTVKGYSIIDQATLSNKATIFVTLVPWDERLPKGITDQKVLAEIRQKTSGISD
ARIRMFTPPAISGIGSTGGQKMVLQDLLGGDYVGLDRVSRSMSQYAQQDPVLGNVFSNFN
VNVPYYDLRIDMEKAKMMNVALPDIYDALSSYLGASYVNDFTKWGRTFQVYMQGDAKDRR
TIQDIRALQVRNGDNKLVSLGSLVKLEEKVGPDLITRYNLYSAAMINGVPQAGASSGDAI
EAMNQMASKTITNTMKTDWTGFTFEELKAASQVSLIFLLAIVLVFLVLAGLYESWIDPLI
VIMVIPMSIVGAVLGAYFRHLSNDIYMQIGLILLVALSCKNAILIVEFIRDLKKEMSVSK
ALLEAGRIRFRPILMTSLTFILGVLPLVIANGVGANSRHSLGTTVFFGMITGTVFAVLLI
PPLYGLIHRWIHKD
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaaatattttatacaacgaccgatcttatcaacggtagtgtcgttgatcatt
gtgattttaggaggggtatccttgcttaagctcccagtcaatcaatatcctaatataacc
ccaacgaatgtgtctgttaacgcgacttatcctggggcaagttctgagattattgccaat
accgtaggtgcacctttagaacaggctattaatggtgtggagggaatgacttatatgtcc
tcggtgagtaataacgatggatcgtatcagttgacagtcacttttgaagtgggaacagat
gtgaatatggcaactgttttggtacagaataaagtgaatcaagcacttcctaaactaccg
gagatcgttcagactttgggggtaaccactgacaagaagtctacagacatggtttcgatc
atgggtttaaattcgaaagatccgacggtacctttatcgtttctaaccaactatgcatcc
acttatattgtagatgagctgaagcgtattcctggagtggcttcgattactgtttttggt
gccggggattatagtattcgactgtggttagatcctgtgaaactgaagaaccgtaatttg
actcctgccgatgtaagaagggctattaagaatcaaaacttgcaggtggcatcaggtcaa
ctgggtgctagtcctactgcttcgaatcagcagatgcaactgtctctgatcgtgagtcca
ggacgaatgactaaagagtctgaattcgagaatatcgtgataaagaccgacgccaatggt
aatactatttatctcaaagatattgcaaaagtggagttggggagtaaaagttacaggcga
acggttaaacgagatggaaggcgagtttcggctgctattgctgtgtatcagttgcctgga
ggtaatgcattagatattcacgaagcgatcaataataaatttgatgagttgagtcaatct
tttcctcctgattttgaatattcagagatcaccaataccaccgattttgtgaaggcctct
attcatgaggtcaccttaacgttatttatcgcttttgtgctggtctgtttggtgttgtta
atcttcttacaagattggcgtgccactttagttccagtgatcactatcccagtctctatt
atcggtacttttggagccttggcagcctttggtttttctattaacttgttgacactgttt
gcgatggttctggccattggtattgttgtggatgatgctattgttgttgtggagaatact
gcacgacatattgatttaggagagagccccaaaagggcagctattatcgctatgtcagag
gttacagggccgattattgcaacgacgttggttttgatgtcggtctttcttccacctgca
tttatgggtggtattacaggcgagttgtataagcagtttgcattgactattgctgcatct
accttgttgagtgccatcaatgccttgacgttaagtccagcgctgtctgcaatgtttttg
cgtaagacgaaagagggagagaagaaaggttttgtgtaccgtaagtttaatcagtttttt
gaccgtctgacctcttcgtatagtaatctattagggcgtattgcaagaaagtctgtgatc
tcgttggttatgtttgcaatcatcggagtggtgagcttggtggtgtttaagtctctttcg
acctcatttatacctaatgaagatcaaggtcgtatttttgtggagatctctctgcccaat
gctgcatcggataatagaactgctgaagtattggctgaagtagataagcagttacagacc
atcgatggtattcatacttttatgacggtaaaaggatattcgattattgatcaagctact
ttatctaacaaagctaccatctttgttacattggtaccttgggatgaacgccttcctaaa
ggtattacggaccagaaggttttggctgagataagacaaaagacttcaggtattagtgat
gcaagaatacgaatgtttacacctcctgcaattagtggtattggctcaacaggtggtcag
aagatggttcttcaagatttattgggcggcgactatgttggattagatcgtgtttctcga
tcgatgtctcaatatgcgcagcaagatcctgtgttgggtaatgtgttctcaaattttaat
gtaaatgtgccttattatgatcttcgtatcgatatggaaaaggcgaagatgatgaatgtg
gctttgcctgatatttatgatgctttgtcgtcatatctaggggcgagttatgtgaatgac
ttcaccaaatggggacgaacttttcaggtgtatatgcaaggagatgctaaagataggcga
acgatccaagatatacgagccttgcaggtgagaaatggagataataaattggtctctctc
ggatctttggttaagctagaggagaaggtgggaccggatttgattacgcgttataatcta
tatagcgcagcgatgattaatggggtaccacaggcaggagccagttctggagatgcgatt
gaggcgatgaatcaaatggcatcaaaaacaataaccaataccatgaagaccgattggaca
gggtttacatttgaggagttgaaagcagcgtcacaagtgtcactgatctttttgttggct
attgtacttgtgtttttggtgttggcaggattatatgagagttggatagaccctttgatc
gttattatggttatcccaatgtctatcgttggagcggtattaggggcttattttagacat
ctgtctaacgatatatatatgcagattggtcttattctacttgttgcactgtcttgtaag
aatgcaattttgattgtcgaatttattagagatttgaagaaggagatgagtgtctctaag
gcattgttagaagcgggacgtatacgttttaggcctattttgatgacatcattaactttt
atcttaggtgttttgccattggttattgccaatggtgtaggggcaaatagtcgtcattct
ttaggaactacggtattctttgggatgatcacaggaactgtttttgctgttttgcttatt
ccaccgttgtatggattaatacatcgatggatacataaagattaa
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