KEGG   Hydrogenophaga sp. PBC: Q5W_13405
Entry
Q5W_13405         CDS       T04491                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
hyb  Hydrogenophaga sp. PBC
Pathway
hyb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hyb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Q5W_13405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hyb03400]
    Q5W_13405
Enzymes [BR:hyb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Q5W_13405
DNA repair and recombination proteins [BR:hyb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Q5W_13405
 Prokaryotic type
     Q5W_13405
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH EndIII_4Fe-2S Ogg-HhH HHH_8
Other DBs
NCBI-ProteinID: AOS79887
LinkDB
Position
2829005..2829640
AA seq 211 aa
MKRELIEPFFATLKAANPSPQSELEYTTVFELLAAVLLSAQATDVSVNKATRKLFPVANT
PQAILALGQDGLESYIKTIGLFRSKAKHLMQACRILVERHGGEVPNTREALEALPGVGRK
TANVVLNVAFGQPTMAVDTHIFRVSNRTGLAPGKTPLAVELALMQRVPPEYAVDSHHWLI
LHGRYVCLARKPQCYRCAVAAYCDFTPKTTG
NT seq 636 nt   +upstreamnt  +downstreamnt
atgaagcgcgagctgatcgaacctttcttcgccaccctcaaggcagccaaccccagcccg
cagtcggagctggagtacaccaccgtcttcgagctgctggccgccgtgctgctgtcggcc
caggccacggacgtgagcgtcaacaaggccacgcgcaagctgttcccggtggcgaacacg
ccgcaggccatcctggcgctggggcaggacggcctggagagctacatcaagaccatcggc
ctgttccgcagcaaggccaaacacctgatgcaggcctgccgcatcctggtggagcgccac
ggcggcgaggtgccgaacacccgcgaagccctggaggccctgcccggcgtgggccgcaag
acggccaacgtggtgctcaacgtggccttcggccagcccaccatggcggtggacacgcac
atcttccgcgtgagcaaccgcaccggtctggcaccgggcaagacgccgctggccgtggag
ctggcgctgatgcagcgcgtgccgcccgaatacgccgtggattcgcaccactggctcatc
ctgcacgggcgctacgtgtgcctggcgcgcaagccgcagtgctaccgctgcgcggtggcg
gcgtactgcgacttcacgcccaagacgacgggttga

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