Hydrogenophaga sp. PAMC20947: E5678_06840
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Entry
E5678_06840 CDS
T05960
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hyc
Hydrogenophaga sp. PAMC20947
Pathway
hyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E5678_06840 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyc03400
]
E5678_06840 (nth)
Enzymes [BR:
hyc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
E5678_06840 (nth)
DNA repair and recombination proteins [BR:
hyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E5678_06840 (nth)
Prokaryotic type
E5678_06840 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QCB45763
UniProt:
A0A4V1CHK1
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All DBs
Position
1541233..1541874
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AA seq
213 aa
AA seq
DB search
MNRQNIEAFFATLKAANPEPRTELEYSSNFELLAAVLLSAQATDVGVNKATRKLYPVANT
PQQILDLGLEGLESFIKTIGLYHSKAKHLMAACRILVDQHGGVVPDTREALEALPGVGRK
TANVVLNVAFGQPTMAVDTHIFRVGNRTGLGKGSTPLAVEKQLMKRIPAEYAVDSHHWLI
LHGRYVCQARKPLCYQCAVSAYCDFKPKTAAPK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgccaaaacatcgaggccttcttcgccacgctcaaagcggccaacccggagccg
cgaaccgagctcgaatacagcagcaattttgagctgctggccgccgtgttgttgtcagcc
caggccaccgacgtgggtgtcaacaaagccacgcgaaagctctatcctgtggccaacacg
ccgcaacagatcctggatctgggcctggaagggctggagagtttcatcaaaaccattggc
ctgtaccacagcaaagccaagcacctgatggccgcttgccgcatcctcgtcgatcaacac
ggtggcgtggtgcccgacacccgcgaagccctcgaagccctgccaggcgtgggccgcaaa
acggccaacgtggtgctcaacgtggccttcggccagcccaccatggcggtggacacccac
attttccgcgtgggcaaccgcacgggcctgggcaagggcagcaccccgctggccgttgag
aagcagttgatgaagcgcatacccgccgaatacgccgtggactcacaccactggctgatc
ctgcacgggcgctatgtgtgccaggcgcgcaagcccctgtgttatcagtgtgcggtatcg
gcctattgcgatttcaagccgaagacagctgcaccgaaataa
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