Hymenobacter sp. DG25B: PK28_06880
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Entry
PK28_06880 CDS
T03500
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
hyd
Hymenobacter sp. DG25B
Pathway
hyd00300
Lysine biosynthesis
hyd00550
Peptidoglycan biosynthesis
hyd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PK28_06880
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PK28_06880
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyd01011
]
PK28_06880
Enzymes [BR:
hyd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PK28_06880
Peptidoglycan biosynthesis and degradation proteins [BR:
hyd01011
]
Precursor biosynthesis
Amino acid ligase
PK28_06880
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CbiA
Motif
Other DBs
NCBI-ProteinID:
AIZ63483
LinkDB
All DBs
Position
1606350..1607831
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AA seq
493 aa
AA seq
DB search
MESSLSHPLSFLLTGLNVVAQHGPAEVAVRGLTLDSRQAAPGLAFFALRGAATDGHQFIP
KAVEQGVSVIFCEELPTELNPATTYVQVPDSAAAMAFVAAAFYGQPSRKLKLVGITGTNG
KTTCATVLHKLFRELGYHVGLLSTVQNQIDEEVIPATHTTPDAIRLNELLARMVQAGCSH
VFMEVSSHAVVQHRVTGLHFAGGVFTNLTHDHLDYHGTFDEYLKAKKGFFDALPKTAFAL
TNADDKRGMVMLQNTAARRETYSLRGPATFRARLIENAVHGLHLEVGGHEVQFRLIGVFN
AYNILAIYGAAVLLGEDAAEVLTVLSGLTSAPGRFEPVVSAKTRVTGIVDYAHTPDALEN
VLDTIADIRQPQQQVITVVGCGGNRDGAKRPIMANLACKGSDRVILTSDNPRFEDPNDIL
AQMQAGVLPQDLGKVLTIADRREAIKTACALAGPGDIVLVAGKGHETYQEIKGVRSAFDD
KQTLQEMFTLLGK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttctctctcgcaccccctttcgtttctgctgaccggcctgaatgtagtggcc
cagcacggcccggccgaggtggcagtgcgcggccttacgctggactcgcggcaggcagct
cccgggctggccttcttcgccctgcgcggcgccgctactgatgggcaccagtttattccg
aaggcggtggagcagggggtaagcgttattttctgcgaagagctgcccaccgagctgaac
cccgccaccacctacgtgcaggtgcccgacagcgcggccgccatggcttttgtggccgcc
gctttctacgggcagccttcccgcaagctcaagctggtgggcattacgggtaccaacggc
aaaaccacctgcgccacggtgctgcacaagctcttccgggagctgggctaccatgtgggc
ctgttgagcacggtgcagaatcagattgacgaggaggtaattccggccacgcacaccacg
cccgatgccatccggctgaacgagttgctggcgcgtatggtgcaggccggctgctcccac
gtgtttatggaggtaagctcccacgccgtggtgcagcaccgcgtcacgggcctgcacttc
gcgggcggtgtgtttaccaacctcacccacgaccacctcgactaccacggcacatttgat
gagtatctgaaagccaaaaaaggctttttcgatgcgctgccgaaaacggcgtttgccttg
accaatgctgacgacaagcgcggcatggtgatgctgcagaacaccgccgcccgccgcgaa
acctactcgctgcgcggtccggccacgttccgggcccggctgattgaaaatgccgtgcat
ggcctgcacctggaggtaggcggccacgaagtgcagttccgcctcattggggtgttcaac
gcttataacatcctggccatttatggcgcggcggtgctgctgggcgaagatgccgccgag
gtgctcaccgtactatcggggctgacctccgcgcccgggcgttttgagccggtggtttca
gcgaaaacccgcgtaacgggcattgtagactacgcccacacgcccgatgcgctggaaaat
gtgctcgataccattgccgatatccgccagccccagcagcaggtgattaccgtggtgggt
tgcggcggcaaccgcgacggggccaagcgccccatcatggccaacctggcctgcaagggt
tccgatagagtaattctgacttcggacaacccccgcttcgaagaccccaatgatattctg
gcccaaatgcaggccggcgtactgccccaggacctgggcaaagtactcaccattgccgac
cggcgcgaggccatcaaaaccgcttgcgccttggccggccccggcgacattgtgctggta
gccggcaaaggccacgaaacttatcaggaaatcaaaggcgtacgctccgccttcgacgac
aaacagacactacaggaaatgtttacgctattgggaaaatga
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