Hydrogenophaga sp. ANAO-22: ABSY19_24815
Help
Entry
ABSY19_24815 CDS
T10785
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda01501
beta-Lactam resistance
hyda01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ABSY19_24815
01503 Cationic antimicrobial peptide (CAMP) resistance
ABSY19_24815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyda02000
]
ABSY19_24815
01504 Antimicrobial resistance genes [BR:
hyda01504
]
ABSY19_24815
Transporters [BR:
hyda02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ABSY19_24815
Antimicrobial resistance genes [BR:
hyda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ABSY19_24815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
XHM81015
LinkDB
All DBs
Position
5116267..5119431
Genome browser
AA seq
1054 aa
AA seq
DB search
MAKFFIDRPIFAWVIALFIMVIGGVAITQLPIAQYPPVAPPAIVINTAYPGASAATLEDS
VLSVIEREMNGAPGLIYMESVAQADGSGSITLSFETGTDPELAQVDVQNRLSRATPRLPA
AVTQQGVRVDKSNSNFLLFAMLSSDDPALDPVALGDYAARSVVPELQRLPGVGQAQLFGS
ERAMRIWIDPAKLLGFNLSASDVNNAIRAQNAQVSAGEIGALPNVAGQSIAATVVVNGQL
GSVEQFGNIVLRASADGATVRLKDVARIELGGQAYATSARLSGKPAVGVGVQLSPSGNAL
ATAEAVRTKMHELERFFPTGMKWSIPYDSSRFVKISITQVAQTLGEAMLLVFLVMFLFLQ
NIRYTIIPTIVVPVALLGTFGALLAMGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM
SEEGLPPLQATRKAMSQISGAIVGVTVVLISVFVPLAFFAGSVGNIYRQFSAVMGVSIAF
SAFLALSLTPALCATLLKPVEAGHHHEKTGFFGWFNRGFSRTAKRYERGVAALLPRAGRT
LIIYVAIIAAAAVVYMRLPTSFLPNEDQGTLLVNVQLPPGATQERTLDVMKQVEGFILQQ
PEVESMVGVLGFSFSGQGQNAALAFVTLKDWAERTAPGSSAEAVAGRAFGALSSIRDAFI
YPLSPPPIPELGASSGFSFRLQDRGGLGRDALMSARNQLLGMASQSKVITQVRPDGLEDA
PQLQIDIDRDKANALGVGFDVINAAIGTSLGSSYVNDFPNAGRLQRVVVQADAPARMQPE
DLLRLNVVNNKGQAVPLSAFATTKWITGPMQTVRYNGYPSVRISGSAAPGMSTGAAIAEM
EKLAAQLPQGIGYEWTGQTREEKLAGSQAVILYAFAILAVFLCLAALYESWTIPLSVILV
VPLGVLGVLLATLMRDYSNDVYFQVGLITIIGLSAKNAILIIEFAKDLQAQGKSVIAAAL
EAAHIRFRPIIMTSMAFTLGVLPLAIASGAGSASQRAIGTGVIGGMITGTVLAVIFVPIF
FVVVRTLFKGSERQHQRDAEQAAAHHGPGVQIDV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattcttcattgaccgacccatcttcgcgtgggtgatcgcgctcttcatcatg
gtgatcggcggggtggccatcacccagctgccgatcgcgcagtacccaccggtggccccg
ccggccatcgtcatcaacaccgcctaccccggtgcctcggccgccacgctggaagacagc
gtgctgtcggtgatcgagcgcgagatgaacggcgcgcccggcctgatctacatggaatcg
gtcgcacaggccgatggcagcggcagcatcacgctgagcttcgagaccggcaccgacccg
gaactggcgcaggtggacgtgcagaaccgcttgtcccgggccacgccgcgcctgccggcg
gcggtgacgcagcagggtgtgcgggtggacaagtccaacagcaacttcctgctgttcgcc
atgctctcgagcgacgatccggcgctggaccccgtggcgctgggcgactatgccgcgcgc
agcgtggtgcccgagctgcagcgcctgcccggtgtgggccaggcccagctgttcggctcc
gagcgcgccatgcgcatctggatcgaccccgccaagctgctcggcttcaacctgagcgcg
tccgacgtcaacaacgccatccgtgcgcagaacgcgcaggtctcggctggtgagatcggt
gcgctgcccaacgtggccggccagagcatcgcggccaccgtggtggtcaacggccagctc
ggcagcgtcgagcagttcggcaacatcgtgctgcgcgccagcgccgacggcgccacggtg
cgcctcaaggacgtggcccgcatcgaactcggcggccaggcctacgccacgtcggcgcgc
ctgagcggcaagcccgcggtcggtgtgggtgtgcagctctcgcccagcggcaacgccctg
gccacggccgaggcggtgcgcaccaagatgcacgagctcgagcgcttcttccccaccggc
atgaaatggtcgatcccctacgacagctcgcgcttcgtgaagatctccatcacgcaggtg
gcccagaccctgggcgaagccatgttgctggtgttcctggtgatgttcctgttcctgcag
aacatccgctacaccatcatcccgaccatcgtcgtgccggtggccctgctgggcacgttc
ggcgccttgctggccatgggcttctccatcaacgtgctgaccatgttcggcatggtgctg
gtgatcggcatcgtggtggacgacgccatcgtggtggtggagaacgtcgagcgcatcatg
agcgaggaggggctgccgcccctgcaggcaacccgcaaggcgatgtcgcagatctccggc
gccatcgtcggcgtgaccgtggtgctgatctcggtgttcgtgccgctggcgttcttcgcc
ggctcggtgggcaacatctaccgccagttctcggcggtgatgggcgtgtcgatcgcgttc
tcggccttcctggccctgtcgctcacgcccgcgctgtgcgcgaccctgctcaagccggtc
gaggccgggcaccaccacgagaagacgggcttcttcggctggttcaaccgcggcttctcc
cgcaccgccaaacgctacgagcgtggcgtggccgcgctgctgccgcgcgccggtcgcacg
ctgatcatctacgtggccatcatcgccgccgccgccgtggtctacatgcgcctgccgacg
tcgttcctgcccaatgaagaccagggcacgctgctggtgaacgtgcagctgccgccgggc
gccacgcaggagcgcacgctggacgtgatgaagcaggtggaaggtttcatcctgcagcag
cccgaggtggaaagcatggtcggcgtgctgggcttcagcttctccggtcaggggcagaac
gcggcgctggccttcgtgacgctcaaggactgggccgagcgcaccgcgcccggcagttcg
gccgaggcggtggctgggcgggccttcggcgcgctctcgagcatccgcgatgcgttcatc
tacccgctgagcccgccacccattcccgaactgggggcctcgtccggcttcagcttccgt
ctgcaggaccggggcggtctgggccgcgacgcgctgatgagcgcgcgcaaccagctgctg
ggcatggcctcgcagagcaaggtgatcacccaggtgcgcccggacggcctggaagacgcg
ccgcagctgcagatcgacatcgaccgcgacaaggccaacgccctgggcgtgggcttcgac
gtgatcaatgccgccatcggcacctcgctcggttcgagctacgtcaacgacttccccaac
gccggccgcctgcagcgcgtggtggtgcaggccgacgcgcccgcccgcatgcaacctgaa
gacctgctgcgcctgaacgtggtgaacaacaagggccaggcggtgccgctgtcggccttc
gccaccacgaaatggatcaccggcccgatgcagactgtgcgctacaacggctacccatcc
gtgcgcatcagcggcagcgccgcccccggcatgagcacgggtgcggccatcgccgagatg
gagaagctcgcggcccagttgccgcaaggcatcggctacgagtggaccggccagacgcgc
gaggaaaagctcgccggctcgcaggccgtcatcctgtacgccttcgccatcctggccgtg
ttcctctgcctggccgcgctgtacgagagctggaccattccgctgtcggtgattctggtg
gtgccgctgggcgtgctcggggtgctgctggcgacgttgatgcgcgactactcgaacgac
gtgtacttccaggtggggctgatcaccatcatcggcctctcggcgaagaacgcgatcctg
atcatcgagttcgccaaggacctgcaggcgcagggcaagagcgtgatcgcggcggcgctg
gaagcggcccacatccggttccgccccatcatcatgacctcgatggccttcacgctcggc
gtgctgccgctggcgatcgcctcgggcgccggctcggccagccagcgcgccatcggcacc
ggcgtgatcggcggcatgatcaccggcaccgtgctggcggtgatcttcgtgccgatcttc
tttgtggtggttcgcaccctgttcaagggcagcgaacgccagcaccagcgggatgccgaa
caagcggccgcccaccatggcccaggagtgcaaatcgatgtttaa
DBGET
integrated database retrieval system
