Hydrogenophaga sp. ANAO-22: ABSY19_25625
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Entry
ABSY19_25625 CDS
T10785
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABSY19_25625 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyda03400
]
ABSY19_25625 (nth)
Enzymes [BR:
hyda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABSY19_25625 (nth)
DNA repair and recombination proteins [BR:
hyda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABSY19_25625 (nth)
Prokaryotic type
ABSY19_25625 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
XHM81169
LinkDB
All DBs
Position
complement(5287399..5288037)
Genome browser
AA seq
212 aa
AA seq
DB search
MTPTQIEAFFATLQAANPTPQTELEYTSVFELLAAVLLSAQATDVGVNKATRKLFPVANT
PQAILDLGLEGLEGYIKTIGLYRSKAKHLMQTCRMLVEQHGGEVPGTREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVSNRTGLAPGKTPLAVELQLMKRVPPAYAVDSHHWLI
LHGRYVCQARKPLCPRCAVIACCDFKDKTTSL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccacccagatcgaagcttttttcgccacgctccaggccgccaaccccaccccg
cagaccgagctggagtacaccagcgtgttcgagctgctcgccgccgtgctgctctcggcg
caggcaaccgacgtgggcgtcaacaaggccacgcgcaagctgttcccggtggcgaacacg
ccgcaggccatcctcgacctggggctggaagggctggagggctacatcaagaccatcggc
ctgtaccgcagcaaggccaaacacctgatgcaaacctgccgcatgctggtggaacagcac
ggcggcgaggtgcccggcacgcgcgaggcgctcgaggccctgcccggcgtgggccgcaag
acggccaacgtggtgctcaacgtggccttcggcgaacccaccatggcggtggacacgcac
atcttccgcgtgagcaaccgcaccggcctggcgccgggcaagacgccgctggcggtggaa
ctgcagctgatgaagcgcgtgccgcccgcctacgcggtggactcgcaccactggctgatc
ctgcacgggcgctacgtgtgccaggcgcgcaagccgctgtgcccgcgctgcgcggtgatc
gcctgttgcgatttcaaggacaaaaccacctcgctctga
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