Hydrogenophaga sp. ANAO-22: ABSY19_26965
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Entry
ABSY19_26965 CDS
T10785
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hyda Hydrogenophaga sp. ANAO-22
Pathway
hyda01501
beta-Lactam resistance
hyda01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hyda00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ABSY19_26965
01503 Cationic antimicrobial peptide (CAMP) resistance
ABSY19_26965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hyda03036
]
ABSY19_26965
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyda02000
]
ABSY19_26965
01504 Antimicrobial resistance genes [BR:
hyda01504
]
ABSY19_26965
Chromosome and associated proteins [BR:
hyda03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
ABSY19_26965
Transporters [BR:
hyda02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ABSY19_26965
Antimicrobial resistance genes [BR:
hyda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ABSY19_26965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
BSH_CzcB
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND
BSH_CusB
Biotin_lipoyl
HH_CzcB
CzcB_C
BSH_YknX
HH_EMRA
BSH_LcnD
Beta-barrel_AprE
8xMP
Beta-barrel_YknX
Val_tRNA-synt_C
Motif
Other DBs
NCBI-ProteinID:
XHM81415
LinkDB
All DBs
Position
5547181..5548338
Genome browser
AA seq
385 aa
AA seq
DB search
MANKALYVVVAVVGIGLASCAAWWLQNRDAIAPPVAGTGPGASGATAGGAPGVEVTRVKA
IRLQDDAQAVGTLRSRQSVTLKPETSGRVARIVFADGARVKAGQLLVQLDDTLQRAELSQ
AQAQLSIARANLKRNQELVAQNFVAQRVVEESQANLQVAEAQVALADARLQRMRITAPFA
GTVGLRSINLGAYVKDGDNLVNLEDTSMLTVDFRLPERYQTQLAPGQVVQVQLDALPNRS
FEAKVLAVDPLLDANGRSISVRAVMPPAADNVLRPGMFARVLIVFSVNERALVVPEEALV
PQAGKQYAYVLDEQGEGDAKKRHSRRVEVALGARRGSDVEVVSGLRQGDTVVIAGQQRLQ
RDGTAVRVVNMAAPAAAETAPAPAR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaagcgctttacgtggtggtggccgtcgttggcatcggtctggcctcctgt
gcggcctggtggctgcagaaccgggatgccatagccccgcctgtggccggcaccggaccg
ggcgcttccggtgcaacggccggtggcgcacccggcgtggaggtgacgcgggtgaaggcc
atccggctgcaggacgacgcccaggccgtgggcaccctgcgctcccgccagagcgtgacg
ctcaagcccgagaccagcggccgggtggcccggatcgtcttcgcggacggcgcccgggtc
aaggcgggccagttgctggtgcaactcgacgacaccttgcagcgcgccgagttgagccag
gcgcaggcccagttgtccatcgcgcgcgccaacctcaagcgcaaccaggagctggtggcg
cagaacttcgtggcccagcgcgtggtggaggaaagccaggccaacctgcaggtggccgaa
gcccaggtggcgctggccgacgcgcggctgcagcgcatgcgcatcaccgccccgttcgcg
ggcaccgtgggcctgcgcagcatcaacctgggggcctacgtgaaggacggcgacaacctc
gtgaacctcgaggacacgtccatgctcacggtggacttccgcttgccggagcgctaccag
acccagctcgccccgggccaggtggtgcaggtgcagctcgatgccttgccgaaccgctcg
ttcgaagccaaggtgctggccgtggacccgctgctcgacgccaatggccgctccatctcc
gtgcgggccgtcatgccgcccgcagccgacaacgtgttgcgtcccggcatgttcgcgcgc
gtgctgatcgtcttctcggtcaacgagcgcgcgttggtggtgcccgaggaagccctggtg
ccccaggccggcaagcagtacgcctacgtgctcgacgaacagggcgagggcgacgcgaag
aagcgccactcgcgccgggtggaagtggccctgggcgcgcgccggggttcggatgtcgag
gtggtcagcggcctgcggcagggcgacaccgtggtgatcgccggccagcagcggctgcag
cgcgatggcaccgcggtgcgggtcgtgaacatggctgcgcctgccgccgctgaaacggcc
ccggcgccggcgcgctga
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