Hydrogenophaga sp. SNF1: SOM08_02405
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Entry
SOM08_02405 CDS
T10669
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr00010
Glycolysis / Gluconeogenesis
hydr00020
Citrate cycle (TCA cycle)
hydr00620
Pyruvate metabolism
hydr00785
Lipoic acid metabolism
hydr01100
Metabolic pathways
hydr01110
Biosynthesis of secondary metabolites
hydr01120
Microbial metabolism in diverse environments
hydr01200
Carbon metabolism
hydr01210
2-Oxocarboxylic acid metabolism
Module
hydr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
Enzymes [BR:
hydr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
SOM08_02405 (mdeB)
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NCBI-ProteinID:
WQB84180
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Position
503784..506366
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AA seq
860 aa
AA seq
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MNPHDLISQDPDPQETAEWQEAFLSLLQSQGPARARQMLDGLVALARRERVGWRPRLNTP
YVNTIAAEQQPPFPGDLAIEERLASLMRWNALAMVVRANQAHGELGGHIASYASAADLFE
TGFNHFFHARCESHGGDLVFFQPHSAPGVYARAFLDGRLSERDLMHYRQEIVAPGQGARG
LSSYPHPWLMPDFWQFPTGSMGIGPISSIYQARFMRYLQHRGLLDTGGRTVWGVFGDGEM
DEPESMSALTLAAREKLDNLVWVVNCNLQRLDGPVRGNDRIIDELERLFAGAGWNVIKLL
WGSDWDGLFARDPGGALAQALGDTVDGQMQTFAAKDGRFNRENFFGQNPALAALVQGLSD
EQIDRLKRGGHDLVKIHAAYAAAVAHRGQPTVILAHTKKGYGMGAAGQGRMTTHSQKKLD
ADDLLAFRDRFALPLSDEQATGLAFYKPAEDSAELRYLRERRAALGGALPRRETACEPVP
VPAAEAYAGFALNAGGKEMSTTMAFVRLLGNLLKDGALGPRIVPIVADEARTFGMANLFK
QVGIYSSVGQRYAPEDIGSVLSYREALDGQILEEGISEAGAIASWTAAATSYSVHGLAML
PFYIYYSMFGFQRVGDAIWAAADQRARGFLLGATSGRTTLGGEGLQHQDGSSHLVAATIP
NCKAYDPAFAGELALIVDAGLREMLVEQRDVFYYLTLMNQNYAQPDLPASAREGVLKGGY
VFGRFGPVDGAPLTLLGSGAILTEVRGAAERLAQQGFCVHVCSITSWSELAREAQAAEAE
GRDSWLGQVLAGTAGPVLAASDYVRAVPEALRAWLPPGRAYRTLGTDGFGRSDTRAALRA
FFQVDAASIAEAARRAGPAR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaatccccacgacctcatctcccaggacccggacccgcaggaaaccgccgaatggcag
gaggccttcctgtcgctgctgcagtcgcagggccccgcgcgcgcgcgccagatgctcgat
ggcctggtggcgctggcgcggcgcgagcgcgtgggctggcggccgcggctgaacacgccc
tacgtgaacaccatcgcggccgagcagcagcccccgttcccgggcgacctcgccatcgag
gagcgcctggcttcgctgatgcgctggaacgccctggccatggtggtgcgcgccaaccag
gcccatggcgagctgggcgggcacatcgccagctacgccagcgcggccgacttgttcgag
accggcttcaaccacttctttcacgcgcgctgcgaatcgcacggcggcgacctggtgttc
ttccagccgcacagcgcgcccggcgtgtacgcgcgcgcctttctcgacgggcgcctgagc
gagcgcgacctgatgcactaccgccaggagatcgtcgcgcccgggcagggtgcgcggggc
ctgtccagctacccgcacccctggctcatgcccgacttctggcagttccccacgggctcc
atgggcatcggccccatcagctcgatctaccaagcgcgcttcatgcgctacctccagcac
cgaggcctgctggacaccggtgggcgcaccgtgtggggcgtgttcggcgacggcgagatg
gacgagcccgagagcatgagcgcgctcaccctggccgcgcgcgagaagctcgacaacctg
gtgtgggtggtcaactgcaacctgcagcggctcgatggcccggtgcgcggcaacgatcgc
atcatcgacgagctggagcgcctgttcgcgggcgcgggctggaacgtcatcaagctgctg
tggggcagcgactgggacggtctgttcgcgcgcgatcccggcggcgcgctggcgcaggcc
ctgggcgacacggtggatggccagatgcagaccttcgccgccaaggacggccgcttcaac
cgcgagaacttcttcgggcagaacccggcgctggccgcgctggtgcagggcctgagcgac
gagcagatcgatcgcctcaagcgcggcgggcacgacctggtgaagatccacgccgcctac
gccgccgccgtggcgcaccgcggacagcccacggtgatcctggcgcacaccaagaagggc
tacggcatgggcgccgccggccagggccgcatgaccacgcacagccagaagaaactcgac
gccgacgacctgctggcctttcgcgaccgcttcgcgctgccgctgagcgacgagcaggcc
acgggcctggccttctacaagccggccgaggacagcgccgagctgcgctacctgcgcgaa
cgccgcgccgccctgggcggcgccctgccgcggcgcgagaccgcgtgcgagccggtgccc
gtgcccgccgccgaggcctacgcgggcttcgcgctgaacgccggcggcaaggagatgagc
accaccatggccttcgtgcgcctgctgggcaacctgctcaaggacggcgcgctgggtccg
cgcatcgtgcccatcgtggccgacgaggcgcgcaccttcggcatggccaacctgttcaag
caggttggcatctacagcagcgtgggccagcgctacgcgccggaggacatcggctcggtg
ctgagctaccgcgaggcgctggacgggcagatcctggaggagggcatcagcgaggccggc
gccatcgccagctggacggccgcggccaccagctacagcgtgcacggcctggccatgctg
cccttctacatctactactcgatgttcggtttccagcgcgtgggcgacgccatctgggcc
gcggccgaccagcgcgcgcgcggcttcctgctgggcgccacctcgggccgcaccacgctg
ggcggcgagggcctgcagcaccaggacggcagcagccacctggtggccgcgaccattccc
aactgcaaggcctacgacccggccttcgcgggcgagctggcgctcatcgtcgacgccggc
ctgcgcgagatgctggtggagcagcgcgacgttttctactacctcacgttgatgaaccag
aactatgcccagcccgacctgccagcctcggcgcgcgaaggcgtgctgaagggcggctac
gtcttcggccgcttcgggccggtggacggcgcgccgctcacgctgctgggctcgggcgcc
atcctcaccgaggtgcgcggcgcggccgagcggctggcgcagcaggggttttgcgtgcac
gtgtgcagcatcacgagctggagcgaactcgcgcgcgaggcgcaggccgccgaggccgag
gggcgcgactcttggttgggccaggtgctggccggcaccgccgggccggtgctggccgcg
agcgactatgtgcgcgccgtgcccgaggcgctgcgcgcctggctgccgccgggccgcgcc
taccgcaccctgggcaccgacggcttcggccgcagcgacacgcgcgcggcgctgcgcgcg
ttcttccaggtggacgcggccagcatcgccgaggcggcgcggcgcgcagggccggcgcgc
tga
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