Hydrogenophaga sp. SNF1: SOM08_09925
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Entry
SOM08_09925 CDS
T10669
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr01501
beta-Lactam resistance
hydr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SOM08_09925
01503 Cationic antimicrobial peptide (CAMP) resistance
SOM08_09925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hydr03036
]
SOM08_09925
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hydr02000
]
SOM08_09925
01504 Antimicrobial resistance genes [BR:
hydr01504
]
SOM08_09925
Chromosome and associated proteins [BR:
hydr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SOM08_09925
Transporters [BR:
hydr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SOM08_09925
Antimicrobial resistance genes [BR:
hydr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SOM08_09925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
SOUL
DUF2577
Motif
Other DBs
NCBI-ProteinID:
WQB85613
LinkDB
All DBs
Position
2088929..2090074
Genome browser
AA seq
381 aa
AA seq
DB search
MAKPKSTVWLAVLGLALALGGAWWWQQQPRASGVSGSAGAASAPRAASGAGPVSVEIAAV
KQARLQDDAQAVGSLNSRQAVTLKPETAGRVARIAFKDGQGVKRGQLLVQLDDTLQRAEL
SQAQAQLSIARANLKRNEELLAQSFVAARVVDESRAALQVAEAQVDLAQARLQRMRITAP
FDGTLGLRSINLGQYVKDGDPLVNLEDTSQLTVDFRLPERYQNRIAPGQSVQVQLDALPG
QRYPARVLAVDPLLDANGRSIAVRAEMPSSRGQELRPGMFARVLIVFSVNENALVVPEEA
LVPQGGRQYVYVLDEQGQGDARKRTSRRVEVELGVRRGADVQITQGLKPGDTVVVAGQQR
LQRDGTVVRVVDLAARAAAAN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacccaaatcaacggtctggctggcggtgctgggcctggcgctggcgctgggc
ggtgcctggtggtggcagcagcagccgcgcgcctcgggcgtgtccggctcggcgggcgcg
gcctcagcgccccgtgccgccagcggcgccggtccggtcagcgtggagatcgccgccgtc
aagcaggcgcgcctgcaggacgacgcccaggccgtgggctcgctgaactcgcgccaggcc
gtcaccctcaagcccgaaacggcgggccgcgtcgcccgcatcgcgttcaaggacggccag
ggcgtcaagcgtggccagttgctggtgcagctcgacgacacgctgcagcgcgccgagctg
agccaggcccaggcccagctgtccatcgcgcgcgccaatctcaagcgcaatgaggagctg
ctggcgcagagcttcgtggccgcgcgcgtggtggacgaaagccgcgccgccctgcaggtg
gccgaggctcaggtggacctggcccaggcgcggctgcagcgcatgcgcatcaccgcgccc
ttcgatggcacgctgggcctgcgcagcatcaacctgggccagtacgtgaaggacggcgat
ccgctcgtcaacctggaggacacctcccagctgacggtggatttccgcctgcccgagcgc
tatcagaaccgcatcgccccgggccagtccgtgcaggtgcagctcgacgcgctgcccggc
cagcgctacccggcgcgtgtgctcgcggtcgatcccctgctggacgccaacggccgctcc
atcgcggtgcgcgccgagatgccgtcctcccgcggccaggagctgcgccccggcatgttc
gcgcgcgtgctgatcgtgttctcggtgaacgagaacgcgctggtggtgcccgaggaggcc
ctggtgccccagggcgggcgccagtacgtctacgtgctcgacgagcaggggcagggcgac
gcgcgcaagcgcacctcgcgccgcgtcgaggtggagctgggggtgcgccgcggcgccgac
gtgcagatcacccagggcctgaaacccggcgacaccgtggtggtggccggccagcagcgc
ctgcagcgcgacggcaccgtggtgcgcgtggtggacctggcggcccgcgccgccgccgcg
aactga
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