Hydrogenophaga sp. SNF1: SOM08_15315
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Entry
SOM08_15315 CDS
T10669
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hydr Hydrogenophaga sp. SNF1
Pathway
hydr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hydr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOM08_15315 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hydr03400
]
SOM08_15315 (nth)
Enzymes [BR:
hydr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SOM08_15315 (nth)
DNA repair and recombination proteins [BR:
hydr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOM08_15315 (nth)
Prokaryotic type
SOM08_15315 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
WQB82362
LinkDB
All DBs
Position
3197131..3197766
Genome browser
AA seq
211 aa
AA seq
DB search
MKRELIEPFFATLKASNPSPQSELEYTTVFELLAAVLLSAQATDVSVNKATRKLFPVANT
PQAILALGLEGLEGYIKTIGLFRSKARHLMETCRILVERHGGEVPRTREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVSNRTGLAPGKTPLAVELALMKRVPPEYAVDSHHWLI
LHGRYVCLARKPQCHRCAVAAYCDFTPKTAG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgagctgatcgaacccttcttcgccaccttgaaggcgagcaaccccagcccc
cagtcggagctggaatacaccaccgtcttcgagctgctggccgccgtgctgctgtcggcc
caggccaccgacgtgagcgtcaacaaggccacgcgcaagctgttccccgtggccaatacg
cctcaggccatcctggccctggggctcgaggggctggagggctacatcaagaccatcggc
ctgttccgcagcaaggcccggcacctcatggagacctgccgcatcctggtggagcgccac
ggtggcgaggtgccgcgcacgcgcgaggcgctggaggccttgcccggcgtgggccgcaag
acggccaacgtggtgctcaacgtggccttcggcgagcccaccatggcggtggacacgcac
atctttcgcgtcagcaaccgcaccggcctggcgccgggcaagacgccactggccgtggaa
ctggcgctgatgaagcgcgtgccgcccgagtacgcggtggattcgcaccactggctcatc
ctgcacgggcgctacgtgtgcctggcgcgcaagccgcagtgccaccgctgcgcggtggcg
gcgtactgcgacttcacacccaagacggcgggttga
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