Hydrogenophaga crassostreae: LPB072_14155
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Entry
LPB072_14155 CDS
T04505
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hyl
Hydrogenophaga crassostreae
Pathway
hyl01501
beta-Lactam resistance
hyl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hyl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LPB072_14155
01503 Cationic antimicrobial peptide (CAMP) resistance
LPB072_14155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hyl02000
]
LPB072_14155
01504 Antimicrobial resistance genes [BR:
hyl01504
]
LPB072_14155
Transporters [BR:
hyl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LPB072_14155
Antimicrobial resistance genes [BR:
hyl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LPB072_14155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AOW13814
UniProt:
A0A163CQL3
LinkDB
All DBs
Position
complement(3078436..3081591)
Genome browser
AA seq
1051 aa
AA seq
DB search
MAKFFIERPIFAWVIALFVMVLGAVSITQLPIAQYPPVAPPSISINASYPGASAKTLEDS
VLSVIEQEMNGSPGLIYMEAVAQANGTGSITLSFEPGTNADLAQVDVQNRLARATPRLPS
AVTQQGVRVDKARSNFLMFAMISSTDPKWDPVALGDYASRSILPEIQRLDGVGQAQLFGT
ERAMRVWIDPGKLLGFNLSAADVIAAIRAQNAQVSAGEIGALPNVAGQGIAATVVVNGQL
GTVEEFSNVVLRASNDGATVRLKDVARIELGAQAYATSARLNGVQAVGIGVQQSPSGNAL
ATADAVRTRMAELEKFFPDGMKWEIPYDSSRFVKISIEEVAKTLAEAVFLVFLVMFLFLQ
NWRYTVIPTIVVPVALLGTFGALLAMGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM
SEEGLPPLEATRKAMGQISGAIIGVTVVLIAVFVPLAFFSGSVGNIYRQFAAVMATSIAF
SAFMALSLTPALCATLLKPVEAGHHHEKKGFFGWFNRGFSRTAKRYESGVAALLPRAGRT
LIIYAAIVAAAVVIYQRLPTSFLPNEDQGTMLVNVQLPPGATRERTEGVMKQVEGFMLKQ
PEVQSMVSVLGFSFSGQGQNAALAFVTLKDWSERTGEGSSAQGLAGRAFGALSGIRDAFI
FPLSPPPIPELGSSSGFSFRLQDRAGLGREALLNARNQMMGLASQSKILTGVRPDGLEDA
PQLQLDIDRDKASAQGVSYDAISSAIGTSLGSSYVNDFPNAGRLQRVMVQADAPARMQPD
DLLRITVNNSQGKAVPLSAFATTKWITGPMQTVRYNGYPAMRISGSAAPGQSTGAAMAEM
ERLASQLPQGFGFEWTGQSREEKLAGSQAIILYAFAILAVFLCLAALYESWTIPLAVILV
VPLGVLGVLLATLLRDYSNDVYFQVGLITIIGLSAKNAILIIEFAKDLQAQGKGVIEAAL
AAAHLRFRPIIMTSMAFTLGVLPLALASGAGSASQRAIGTGVIGGMLVGTVLAVIFVPIF
FVVVRTLFKGSERQHRLDAAQAAHHGMNNDA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatttttcattgagcgccccatctttgcgtgggtgattgcgctgtttgtcatg
gtgctgggcgcggtgtccatcacccaactgccgattgcgcagtatccgccggtggcgccg
ccatcgatttcgatcaacgccagctacccaggggcttcggccaagacgctggaagacagc
gtgttgtcggtgatcgagcaagagatgaacggttcgcccggcctcatctacatggaagct
gtggcccaggccaacggcaccggcagcatcacgctgagctttgagcccggcaccaacgcc
gatctggcccaggtggatgtgcaaaaccgcctggcccgtgccacgccgcgcctgccatca
gcggtgacgcagcaaggcgttcgcgtcgacaaggcgcgcagcaacttcctgatgtttgcc
atgatctcgtcgaccgatcccaagtgggatcctgtggcgctgggtgactacgcttcgcgc
agcatcctgcccgagattcaacgccttgacggtgttggtcaggcccagctgttcggtacc
gagcgggcgatgcgcgtgtggatcgatccgggcaagttgctcggcttcaacctcagtgcg
gccgatgtgattgccgcgattcgggcgcaaaacgcgcaggtctcggccggtgaaatcggc
gcgctgcccaacgtggcgggccaaggcatcgccgcgaccgtggtggtcaatggccagctc
ggcacggtggaagagttcagcaatgttgtgctgcgcgccagcaacgacggcgccacggtg
cgcctcaaagacgtggcccgtatcgagctgggtgcccaagcctacgccacgtcggcacgc
ttgaacggcgtgcaggcggtgggtatcggtgtgcagcagtcgcccagcggcaacgctttg
gccacagccgacgcagtgcgcacccgcatggccgaactggaaaagtttttccccgacggc
atgaagtgggagatcccttacgacagctcgcgcttcgtgaagatttccattgaagaagtg
gccaagacgctggctgaagccgtgtttctggtgttcctggtgatgttcctgttcctgcag
aactggcgctacacggtgatcccgaccatcgtggtgccggtggccctgctgggtaccttt
ggcgctttgctggccatgggtttttcgatcaacgtgttgaccatgtttggcatggtgctg
gtgatcggtatcgtggtggacgatgccattgtggtggttgaaaacgtcgagcgcatcatg
agcgaagagggcttgccaccgctggaggccacacgcaaggccatgggccaaatttcgggg
gccatcatcggtgtgaccgtggtgctgatcgctgtgttcgtgccgctggcatttttcagc
ggctcggtgggcaacatttaccgccagttcgcggccgtgatggccacgtcgattgccttt
tcggcctttatggcgttgtccctcacgccggcgctgtgcgccacgctgctgaagcccgtt
gaagcggggcaccaccatgagaagaaaggcttcttcggctggttcaaccgtgggttctcc
cgcaccgccaagcgttacgaaagcggtgttgccgcgctgttgccccgcgctggtcgcacg
ctcatcatttacgcggccatcgtggctgccgctgtggtgatttaccagcgcctgcccacc
tctttcctgcccaacgaagaccagggcacgatgctggtgaacgtgcagttgccgcccggt
gccacccgcgagcgcacggaaggcgtgatgaagcaagtcgaaggcttcatgctcaagcag
cctgaagtgcagagcatggtcagcgtgttgggcttcagcttctcgggtcaggggcagaac
gctgcgctggccttcgtgacactcaaggactggtccgagcgcaccggcgagggcagttcc
gcgcaaggcctcgcgggtcgtgcgttcggcgctttgtcgggcatccgtgatgcgttcatc
tttccgctgagcccgccgcccatcccggaactcggttcgtcgtcgggcttcagtttccgt
ctgcaggaccgcgctggtctgggccgcgaagcattgctcaatgcccgcaaccagatgatg
ggactggcctcgcaaagcaagattctgacgggcgttcgacccgacggtctggaagacgcg
ccacagttgcaactcgatatcgaccgcgataaggccagcgcacaaggcgtgagttacgac
gccatttccagcgccatcggcacctctttgggctcgagctatgtgaatgacttccccaat
gccggtcgcctgcagcgggtgatggtgcaggccgatgcgcctgcgcgcatgcagcccgat
gacttgttgcgcatcacggtcaacaacagccagggcaaagccgtgccgctgtcggccttt
gcgaccaccaagtggatcaccggaccgatgcagaccgtgcgctacaacggctatccggcc
atgcgcatcagcggcagcgccgcacccggccaaagcaccggagcggcgatggccgagatg
gagcggctggccagccagttgccacaaggtttcggctttgagtggactgggcagtcgcga
gaagagaagctcgccgggtcgcaagcgatcatcttgtacgcttttgccatcctcgccgtg
ttcctgtgtctcgccgctttgtacgagagctggaccattccgctggctgtgattctggtg
gtgccgctgggcgtgctgggtgtgttgctggccacgctgctgcgcgactattccaacgac
gtgtatttccaggtggggttgatcacgatcattggcttgtctgcgaagaatgcgattctg
atcattgagttcgccaaggatctgcaagcgcagggcaagggggtgattgaagcagcgttg
gccgccgcccacctgcgtttccgcccgatcatcatgacttcgatggcgtttacgctgggc
gtgttgcctctggccctggccagtggtgctggctctgccagccagcgcgccattggaacg
ggcgtgatcggtggcatgttggtcggtacggtgcttgccgtgatctttgttccgattttc
tttgtggtcgtgcgcacgcttttcaaaggcagcgaacgccaacaccgtctggatgccgca
caagcggctcaccatggaatgaacaacgatgcttaa
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