Hydrogenophaga sp. BPS33: F9K07_17530
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Entry
F9K07_17530 CDS
T06379
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hyn
Hydrogenophaga sp. BPS33
Pathway
hyn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F9K07_17530 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyn03400
]
F9K07_17530 (nth)
Enzymes [BR:
hyn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
F9K07_17530 (nth)
DNA repair and recombination proteins [BR:
hyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F9K07_17530 (nth)
Prokaryotic type
F9K07_17530 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QHE86567
UniProt:
A0A6P1J2C4
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All DBs
Position
3758224..3758862
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AA seq
212 aa
AA seq
DB search
MTPTQIEAFFATLKAANPTPQTELEYTSVFELLTAVLLSAQATDVGVNKATRKLFPVANT
PQAILDLGLEGLESHIKTIGLYRSKAKHLMQTCRMLVEQHGGEVPGTREALEALPGVGRK
TANVVLNVAFGEPTMAVDTHIFRVSNRTGLAPGKTPLAVELQLMKRVPPAYAVDSHHWLI
LHGRYVCQARKPLCPRCAVSAWCGFKDKTVNL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctacccagatcgaagccttcttcgccacgctcaaggccgccaacccaaccccg
cagaccgagctggagtacaccagcgtgttcgagctgctcactgcggtgctgctctccgcg
caagcgaccgacgtgggcgtcaacaaggccacgcgcaagctgtttccggtggccaacacg
ccgcaggccatactcgacctgggcctcgaaggcctggagagccatatcaaaaccatcggc
ctctaccgcagcaaggccaaacacctgatgcagacctgccgcatgctggtggagcagcac
ggcggcgaggtaccaggcacccgcgaggcgctcgaagccttgccgggcgtgggccgcaag
accgccaacgtggtgctcaacgtggcttttggcgagcccaccatggcggtggacacgcac
atctttcgcgtcagcaaccgcaccggcctggcgccgggcaagacaccgctggcggtcgag
ctgcagttgatgaaacgcgtgccgcccgcctacgccgtggactcgcaccactggctcatc
ctgcacgggcgctatgtctgccaggcgcgcaagccgctgtgcccgcgctgcgcggtctcg
gcctggtgcggcttcaaggacaaaaccgtcaacctttga
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