Hydrogenophaga sp. BPS33: F9K07_24570
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Entry
F9K07_24570 CDS
T06379
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
hyn
Hydrogenophaga sp. BPS33
Brite
KEGG Orthology (KO) [BR:
hyn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
F9K07_24570 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hyn03000
]
F9K07_24570 (dksA)
03021 Transcription machinery [BR:
hyn03021
]
F9K07_24570 (dksA)
03009 Ribosome biogenesis [BR:
hyn03009
]
F9K07_24570 (dksA)
Transcription factors [BR:
hyn03000
]
Prokaryotic type
Other transcription factors
Others
F9K07_24570 (dksA)
Transcription machinery [BR:
hyn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
F9K07_24570 (dksA)
Ribosome biogenesis [BR:
hyn03009
]
Prokaryotic type
rRNA transcription factors
F9K07_24570 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
QHE87843
LinkDB
All DBs
Position
complement(5341125..5342195)
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AA seq
356 aa
AA seq
DB search
MKAPATKTAKSGKPAASAAKKSTVVSPTKKPAAKKPAVKAVAKPASKTAAKTARTLPKAA
PKAPAKTKVVAKVAAKAVPKATVKPAAKPTHTTSKPAVPTKSVQAPAKKSAAKATTKAPG
PSVPLSAAPATTTHAAAAKRPSAAPAQAVIEPAPRPLGKRAAKKVMMEQMAQAEVVPTHA
PDAAKATFSHMNERAVMTPPVPSSIQKDPKRANNWKTLPVEQLTDPDIQAMPDGEYMSDL
QLAYFRRKLSQLKSDMLANAGETTEHLREDTVVVPDPADRATIEEEHALELRTRDRERKL
LKKIEQAIARIDAGDYGYCEETGEPIGVGRLMARPTASLSLEAQQRRELKQKMFGD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccccggctaccaagactgcgaaatcaggcaaacctgcggcgtcggcggccaag
aagagcacggtggtttccccaaccaagaagccggcggccaaaaagccagccgtgaaggcc
gtcgccaagccggcgtccaagaccgcagccaagactgcgcgcacgctcccgaaggcagct
cccaaggcccccgccaaaaccaaggtggtggccaaggtggccgccaaggcggtgcccaag
gcaacggtcaaacccgcagccaaacccactcacacgacgagcaaacccgctgttcccacc
aagagtgtccaagctccggccaagaagtccgccgcaaaagccactaccaaagcccctgga
ccttctgtgcccctctctgccgctcctgctaccaccacccacgccgccgccgccaagcgt
ccatcggccgctccggcgcaggccgtgatcgagcccgcgccacgccctttgggcaagcgc
gcggccaaaaaggtcatgatggagcagatggcgcaggcggaggtggttcccacccatgcc
ccggacgccgccaaggcgaccttttctcatatgaatgaacgtgccgtgatgaccccaccc
gtgccctcctcgatccagaaggatcccaagcgcgccaacaactggaaaacccttccggtt
gagcaactcaccgatcccgacatccaggcgatgcccgacggcgagtacatgagcgatctg
cagttggcgtatttccgccgcaagctctcccagctcaaatccgacatgctggccaacgcg
ggcgaaaccaccgagcacctgcgcgaagacacggtggtggtgcccgatcccgccgaccgc
gccaccatcgaagaagagcatgcgctggagttgcgcacgcgcgatcgtgaacgcaaattg
ctcaagaagatcgagcaggcgattgcccgcatcgacgcgggtgattacggttactgcgaa
gaaaccggcgagcccattggcgtgggccggctgatggcccgccccacggccagcctctcg
ctggaagcccagcagcgccgcgaactcaaacagaagatgttcggggactga
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